Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RNU6-278P-201ENST00000390945 109 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RN7SKP284-201ENST00000411002 343 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RPL17P12-201ENST00000413391 526 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AL590365.1-201ENST00000450788 243 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RNU7-23P-201ENST00000459465 62 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AP000852.1-201ENST00000472460 573 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RPL31P41-201ENST00000477967 372 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RPL9P6-201ENST00000492764 598 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RPF2P2-201ENST00000504693 896 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 MTND5P13-201ENST00000513046 1079 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RNA5SP291-201ENST00000517222 105 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC103810.1-201ENST00000579873 453 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC239868.4-201ENST00000608318 671 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AC091953.2-201ENST00000623979 160 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 AL160394.1-201ENST00000624765 724 ntBASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.37□□□□□ -2.03
UBQLN1Q9UMX0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 RNU6-511P-201ENST00000363496 107 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 Y_RNA.169-201ENST00000363745 96 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 RNY3P13-201ENST00000365542 102 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 RPL22P17-201ENST00000438729 315 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL160314.1-201ENST00000490836 438 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AF131216.2-201ENST00000512316 564 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 DPPA3P3-201ENST00000603842 430 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC103710.2-201ENST00000609912 942 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC027807.2-201ENST00000616099 408 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC068057.2-201ENST00000624047 895 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC099654.13-201ENST00000639774 207 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.36□□□□□ -2.03
UBQLN1Q9UMX0 AC092104.1-201ENST00000497346 1441 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNU4-1-201ENST00000363925 141 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNU5E-5P-201ENST00000365379 116 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNU6-140P-201ENST00000384566 108 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNU6-14P-201ENST00000384630 106 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RNU2-62P-201ENST00000410868 191 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 ELOCP17-201ENST00000414751 326 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 BTF3L4P3-201ENST00000418879 476 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 ZNF863P-201ENST00000426746 417 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 MTND1P30-201ENST00000441241 901 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC098826.2-201ENST00000452011 651 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 MTND1P12-201ENST00000455231 147 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 MRPS36P2-201ENST00000512569 299 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AP003122.4-201ENST00000530980 758 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 MRPS36P5-201ENST00000551909 298 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 RPS3AP4-201ENST00000555161 764 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC109446.2-201ENST00000567872 497 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC090616.3-201ENST00000582184 217 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AC012065.4-201ENST00000602445 679 ntBASIC2.35□□□□□ -2.03
UBQLN1Q9UMX0 AL031775.1-201ENST00000607014 887 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms