Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SNORA63-201ENST00000363450 132 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RNA5SP51-201ENST00000364750 119 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SNORA73.2-201ENST00000364946 201 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RNU6-701P-201ENST00000384059 107 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RNU6-76P-201ENST00000384060 104 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SNORD3H-201ENST00000384486 214 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SYF2P2-201ENST00000417620 583 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC024082.2-201ENST00000434771 238 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 MTCYBP6-201ENST00000441810 138 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RPS3AP46-201ENST00000448352 682 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RBBP4P6-201ENST00000508098 202 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RN7SKP209-201ENST00000516888 304 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SNORA31.20-201ENST00000517111 133 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SNORA31.22-201ENST00000517204 135 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 RANP9-201ENST00000519957 271 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 Z82243.1-201ENST00000609432 473 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC015967.1-201ENST00000619893 476 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AL133216.2-202ENST00000634512 349 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 AC004925.1-201ENST00000624256 2706 ntBASIC3.72□□□□□ -1.81
DKK3Q9UBP4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DKK3Q9UBP4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
DKK3Q9UBP4 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.81
DKK3Q9UBP4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.71□□□□□ -1.81
DKK3Q9UBP4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AL365440.1-201ENST00000436135 2167 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SNORD113-7-201ENST00000363762 77 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 POLHP1-201ENST00000411806 470 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 RPL7P10-201ENST00000417407 739 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC020550.1-201ENST00000447385 163 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SCARNA18-201ENST00000459004 134 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 HMGN2P13-201ENST00000476476 274 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC083904.1-201ENST00000487828 231 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 TRBVA-201ENST00000498804 316 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 HMGB1P22-201ENST00000505315 124 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SNORA31.3-201ENST00000516029 96 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC090136.1-201ENST00000520009 240 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 MIR5583-1-201ENST00000580941 59 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC067852.3-201ENST00000589177 561 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 XIAPP1-201ENST00000603162 600 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AL133393.1-201ENST00000603277 287 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC104763.2-201ENST00000604179 382 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 uc_338.15-201ENST00000615470 191 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AC103705.1-201ENST00000619013 241 ntBASIC3.71□□□□□ -1.82
DKK3Q9UBP4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
DKK3Q9UBP4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms