Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPS15AP6-201ENST00000420703 385 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1046P-201ENST00000516538 107 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP471-201ENST00000516971 106 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 DNAJC8P1-201ENST00000554535 372 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 MED28P6-201ENST00000558776 231 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC011494.1-201ENST00000596454 237 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-85P-201ENST00000605989 107 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AP002826.1-201ENST00000608835 315 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AL355810.1-201ENST00000614629 552 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 7SK.10-201ENST00000621414 298 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 AC092608.2-201ENST00000624427 218 ntBASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPARGC1AQ9UBK2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-50P-201ENST00000362356 103 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.33-201ENST00000362591 102 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-596P-201ENST00000365395 98 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 SNORD6-201ENST00000365444 73 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1105P-201ENST00000384774 107 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-985P-201ENST00000410182 104 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 Z85995.1-201ENST00000415547 335 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC113618.1-201ENST00000416747 285 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 HMGB1P9-201ENST00000429856 646 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC097713.2-201ENST00000430199 356 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AL162151.2-201ENST00000448875 158 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AL160314.1-201ENST00000490836 438 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC021146.2-201ENST00000504736 556 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 SNORA70.14-201ENST00000516205 110 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AP003122.3-201ENST00000526316 255 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC084851.1-201ENST00000529105 249 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 ZNF192P1-203ENST00000565888 810 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 MIR4644-201ENST00000579929 84 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 NUTF2P8-201ENST00000604593 363 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 ELOCP5-201ENST00000604924 333 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC106871.1-201ENST00000568324 3102 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 MAPK10-372ENST00000641954 3413 ntBASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.18□□□□□ -1.74
PPARGC1AQ9UBK2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 LINC02471-203ENST00000641941 4752 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.324-201ENST00000365165 102 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 RNU1-115P-201ENST00000365329 160 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-1179P-201ENST00000384667 107 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 TOMM22P1-201ENST00000418578 312 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC004975.1-201ENST00000428733 208 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 DAP3P1-201ENST00000441522 278 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 NDUFB1P2-201ENST00000449477 176 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 NUTF2P7-201ENST00000453086 375 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 FABP5P15-201ENST00000453566 214 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 CEACAMP4-201ENST00000457676 421 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 snoU13.4-201ENST00000458916 104 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC022493.1-201ENST00000492984 337 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC116655.1-201ENST00000508324 901 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-470P-201ENST00000515954 104 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 MIR892C-201ENST00000516410 77 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 MIR2116-201ENST00000517221 80 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AL117187.1-201ENST00000555482 181 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 MIR3690-201ENST00000580266 75 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 MIR4680-201ENST00000580906 66 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 OR1M4P-201ENST00000589199 287 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 AP000787.2-201ENST00000604432 568 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP196-201ENST00000625967 102 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms