Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 MIR5697-201ENST00000578045 78 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 MIR3118-1-201ENST00000581787 76 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL355598.1-201ENST00000604169 202 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL355816.2-201ENST00000610049 647 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC122133.1-201ENST00000613964 233 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC027807.2-201ENST00000616099 408 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC104010.1-201ENST00000616889 150 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC091953.2-201ENST00000623979 160 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AC110491.1-201ENST00000562191 2010 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 AL137003.2-201ENST00000606924 2538 ntBASIC2.13□□□□□ -2.07
CLCF1Q9UBD9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC006020.1-201ENST00000420179 1854 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNA5SP393-201ENST00000363423 117 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-511P-201ENST00000363496 107 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-14P-201ENST00000384630 106 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 Y_RNA.560-201ENST00000384689 102 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 MIR627-201ENST00000384979 97 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-750P-201ENST00000390946 107 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU2-36P-201ENST00000410361 191 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 Y_RNA.608-201ENST00000410647 95 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-920P-201ENST00000410926 92 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC096649.2-201ENST00000416186 393 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RPS15AP12-201ENST00000419498 388 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 SEPT2P1-201ENST00000419651 180 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AL365203.2-201ENST00000423444 196 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 SKA2P1-201ENST00000425592 390 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 MED14P1-201ENST00000430517 648 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RPS12P2-201ENST00000439728 269 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 MTND4P25-201ENST00000441039 533 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC133134.1-201ENST00000466800 359 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AP000797.1-201ENST00000478870 387 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RPL39P36-201ENST00000490784 156 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC026801.1-201ENST00000497178 464 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-143P-201ENST00000516942 93 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 ARL2BPP2-201ENST00000550907 489 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC007336.1-201ENST00000576365 3828 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AL358072.1-201ENST00000604156 575 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC007363.1-201ENST00000604736 620 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 RNU6-87P-201ENST00000607561 108 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC067747.1-201ENST00000608026 250 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC103710.2-201ENST00000609912 942 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC091304.6-201ENST00000619761 202 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AL589994.2-201ENST00000621124 579 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
CLCF1Q9UBD9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 RNU6-553P-201ENST00000364047 96 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 RNU5E-5P-201ENST00000365379 116 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 MRPL42P2-201ENST00000403169 426 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AL031577.2-201ENST00000404133 280 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 RNU2-49P-201ENST00000410666 184 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 OOSP1P1-201ENST00000423265 274 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 SUMO1P4-201ENST00000429430 302 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 MTND1P30-201ENST00000441241 901 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 USP9YP12-201ENST00000450481 570 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AP000852.1-201ENST00000472460 573 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 OR5BN1P-201ENST00000532955 829 ntBASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.11□□□□□ -2.07
CLCF1Q9UBD9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms