Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MAPK10-362ENST00000641864 4484 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN1Q9P244 Z98749.2-208ENST00000381646 500 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 RNU6-45P-201ENST00000384471 107 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 MIR183-201ENST00000384958 110 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 MIR218-2-201ENST00000385006 110 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN1Q9P244 MIR1277-201ENST00000408536 78 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 Y_RNA.604-201ENST00000410574 102 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 Y_RNA.623-201ENST00000411128 95 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC073063.1-201ENST00000434352 607 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 AL353572.1-201ENST00000442490 417 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 RPL38P4-201ENST00000502376 214 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 FAM92A1P2-202ENST00000504766 877 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 MTND4P7-201ENST00000523876 130 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 SNORA59B-202ENST00000578183 701 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 DISC2.1-201ENST00000612827 205 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 U6.42-201ENST00000618440 107 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 AC119674.1-207ENST00000641355 633 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
LRFN1Q9P244 ASNSP3-201ENST00000451989 1306 ntBASIC3.39□□□□□ -1.87
LRFN1Q9P244 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 MFSD8-236ENST00000641509 4050 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 Y_RNA.38-201ENST00000362617 102 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 SNORD3E-201ENST00000362899 217 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RNU6-451P-201ENST00000362921 107 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 SNORD14B-201ENST00000364533 90 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RNU6-877P-201ENST00000383868 107 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 Y_RNA.399-201ENST00000383955 105 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RNU6-434P-201ENST00000384376 107 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RNU6-393P-201ENST00000384475 107 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RNU6-1179P-201ENST00000384667 107 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 SNORA16.2-201ENST00000390991 127 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AL592114.1-201ENST00000403842 483 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC023141.4-201ENST00000412031 328 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 SNRPEP10-201ENST00000420249 274 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC007560.1-201ENST00000426912 237 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AL627311.1-201ENST00000431514 115 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 HMGN2P10-201ENST00000448085 265 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AL583843.1-201ENST00000456070 346 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 HMGB1P30-201ENST00000492455 606 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC116353.2-201ENST00000505332 712 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 MIR5583-1-201ENST00000580941 59 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 NRBF2P5-201ENST00000603087 788 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AL645944.1-201ENST00000603857 493 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AC022418.1-201ENST00000624118 445 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 AP000553.6-201ENST00000641242 118 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN1Q9P244 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.38□□□□□ -1.87
LRFN1Q9P244 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
LRFN1Q9P244 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRFN1Q9P244 AC110774.1-201ENST00000623567 2018 ntBASIC3.37□□□□□ -1.87
LRFN1Q9P244 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
LRFN1Q9P244 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LRFN1Q9P244 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRFN1Q9P244 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.37□□□□□ -1.87
LRFN1Q9P244 Y_RNA.89-201ENST00000363031 102 ntBASIC3.37□□□□□ -1.87
LRFN1Q9P244 RNU6-534P-201ENST00000364877 106 ntBASIC3.37□□□□□ -1.87
LRFN1Q9P244 MIR514A2-201ENST00000385131 88 ntBASIC3.37□□□□□ -1.87
LRFN1Q9P244 MIR514A3-201ENST00000385132 88 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms