Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 RPS29P15-201ENST00000458329 171 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 ARL4AP2-201ENST00000507378 601 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC104806.1-201ENST00000508720 308 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 RNA5SP503-201ENST00000517047 117 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 RN7SKP57-201ENST00000517248 293 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC104383.1-201ENST00000530297 370 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 RANP3-201ENST00000530970 276 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 TPRKBP2-201ENST00000565969 475 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 YPEL5P2-201ENST00000605553 359 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC004492.1-201ENST00000607036 742 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 U4.5-201ENST00000617137 123 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AL512643.1-201ENST00000635735 524 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC068137.3-201ENST00000639191 341 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 AC073869.6-201ENST00000640656 341 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
NPAP1Q9NZP6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC233263.6-201ENST00000631132 1963 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU6-1322P-201ENST00000364309 107 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 SNORA4.3-201ENST00000365564 137 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU6-1029P-201ENST00000384109 107 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MIR483-201ENST00000385070 76 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU6-1158P-201ENST00000391167 107 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC068050.1-201ENST00000394891 380 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL357075.1-201ENST00000404107 726 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU2-68P-201ENST00000410878 191 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MRPL50P2-201ENST00000416821 482 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RPL36AP53-201ENST00000432891 316 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 HIGD1AP11-201ENST00000438361 280 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RPL12P25-201ENST00000455592 494 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU7-63P-201ENST00000459054 62 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 snoU13.28-201ENST00000459235 104 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RNU6-711P-201ENST00000517255 106 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL512310.1-201ENST00000548639 172 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 HMGB1P33-201ENST00000563485 527 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 DEFB131E-202ENST00000602581 683 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AL133393.1-201ENST00000603277 287 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 DUSP12P1-201ENST00000612874 516 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC099506.2-201ENST00000623074 221 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC073308.1-201ENST00000623696 305 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 AC010680.1-201ENST00000590024 3590 ntBASIC2.89□□□□□ -1.95
NPAP1Q9NZP6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 RNU6-1287P-201ENST00000362914 107 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 SNORA38.1-201ENST00000364172 131 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 RNU6-1060P-201ENST00000384664 107 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 U3.19-201ENST00000390893 196 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 CISD1P1-201ENST00000393907 327 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 MIR888-201ENST00000401186 77 ntBASIC2.88□□□□□ -1.95
NPAP1Q9NZP6 Y_RNA.619-201ENST00000410951 90 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms