Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 RNU4-49P-201ENST00000516080 140 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 SNORA31.21-201ENST00000517180 77 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 RN7SKP256-201ENST00000517201 314 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC069113.1-201ENST00000517763 267 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 RNU6-323P-201ENST00000521915 107 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC243972.3-201ENST00000539655 198 ntBASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIN7CQ9NUP9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC138393.1-203ENST00000327086 343 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 RNU6-254P-201ENST00000363377 107 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 RNU6-510P-201ENST00000391239 108 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 Y_RNA.604-201ENST00000410574 102 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 RN7SKP263-201ENST00000411194 309 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 RHEBP3-201ENST00000411920 351 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC023141.4-201ENST00000412031 328 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 OR4C10P-201ENST00000434991 931 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 IFNA20P-201ENST00000436840 528 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AL671855.1-201ENST00000446875 1203 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 HMGN2P10-201ENST00000448085 265 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MTND5P20-201ENST00000448677 143 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 TRBV12-2-201ENST00000489763 344 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 APOOP1-201ENST00000604695 592 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AL137849.1-201ENST00000604767 169 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC087045.1-201ENST00000605856 382 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MIR6798-201ENST00000612887 67 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC022306.2-201ENST00000617563 647 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 AC005858.4-201ENST00000623191 700 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIN7CQ9NUP9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 ADAM3A-203ENST00000461344 2157 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 MIR518D-201ENST00000385014 87 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 RNU4-6P-201ENST00000410804 122 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AL117339.2-201ENST00000430475 180 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 RPS15AP5-201ENST00000436276 388 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC233279.1-201ENST00000455300 423 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 RN7SKP21-201ENST00000516503 220 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 Y_RNA.702-201ENST00000516843 96 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC087241.2-201ENST00000535801 324 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 OR8R1P-201ENST00000543943 764 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 MIR3160-1-201ENST00000577972 85 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 MIR4286-201ENST00000580651 93 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms