Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC098826.3-201ENST00000603823 466 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC069294.1-201ENST00000608397 350 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL589743.7-201ENST00000612637 233 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AP002371.2-201ENST00000624450 503 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC079416.3-201ENST00000624479 549 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RNU6-462P-201ENST00000362659 105 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL109913.1-201ENST00000421173 514 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RPL36AP53-201ENST00000432891 316 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 EXOSC3P1-201ENST00000448649 500 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RNU7-59P-201ENST00000459101 61 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 RPL7P18-201ENST00000478965 734 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC068781.1-201ENST00000488231 618 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AL161798.1-201ENST00000604630 131 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 U2.21-201ENST00000637295 81 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.92□□□□□ -2.1
TREX1Q9NSU2 AC092125.1-201ENST00000562568 1995 ntBASIC1.92□□□□□ -2.1
TREX1Q9NSU2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 MTND5P33-201ENST00000571250 1450 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNA5SP88-201ENST00000365560 109 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 SNORA70B-201ENST00000384210 135 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNU6-658P-201ENST00000384606 106 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 MIR19A-201ENST00000384878 82 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNU6-278P-201ENST00000390945 109 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RPL26P27-201ENST00000414397 437 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL353729.1-201ENST00000425044 720 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AIMP1P2-201ENST00000425294 312 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AC093106.2-201ENST00000428212 385 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 PMCHL2-203ENST00000457791 237 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 snoU109.3-201ENST00000459477 145 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 ANXA2P1-201ENST00000505539 926 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNA5SP216-201ENST00000516111 123 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AC021739.1-201ENST00000559631 174 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 MIR4765-201ENST00000585007 77 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL391813.1-201ENST00000603098 260 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 APOOP1-201ENST00000604695 592 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 RNU6-88P-201ENST00000606801 100 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 DUSP12P1-201ENST00000612874 516 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AL356596.1-201ENST00000624230 379 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 AC007490.1-201ENST00000624321 703 ntBASIC1.91□□□□□ -2.1
TREX1Q9NSU2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TREX1Q9NSU2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
TREX1Q9NSU2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
TREX1Q9NSU2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.9□□□□□ -2.1
TREX1Q9NSU2 UBE2L2-201ENST00000254302 429 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 SNORA4.1-201ENST00000364263 144 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC104651.1-201ENST00000427559 735 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 UBE2D3P1-201ENST00000436669 444 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms