Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL353706.1-201ENST00000436728 494 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC105272.1-201ENST00000438604 198 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 RPS15AP9-201ENST00000439856 381 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 PGBD4P3-201ENST00000440731 581 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL031659.1-201ENST00000447075 539 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 MTCO1P42-201ENST00000457379 726 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC109927.2-201ENST00000506416 303 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 RNU2-10P-201ENST00000516375 211 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC025755.1-201ENST00000521306 278 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC118273.2-201ENST00000532092 465 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC090888.2-201ENST00000559765 1144 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 RPS3AP23-202ENST00000574601 686 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC012213.3-201ENST00000577199 777 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL670379.10-201ENST00000604330 253 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC121334.2-201ENST00000605387 271 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL670379.9-201ENST00000605428 253 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC022893.3-201ENST00000607665 437 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC034229.4-201ENST00000607861 441 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AC009090.3-201ENST00000616553 565 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL607023.1-201ENST00000620045 248 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AL031667.3-201ENST00000620124 655 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 AP001002.2-201ENST00000625137 386 ntBASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.58□□□□□ -2.16
SND1-IT1Q9HBX3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNU6-288P-201ENST00000363690 104 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNU6-960P-201ENST00000364056 120 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNA5SP37-201ENST00000365420 130 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNU6-898P-201ENST00000365627 104 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MIR95-201ENST00000385072 81 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MIR27B-201ENST00000385129 97 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RSL24D1P4-201ENST00000400938 484 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AL139039.1-201ENST00000401900 692 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC019097.1-201ENST00000424783 735 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MYL8P-204ENST00000431574 518 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC104978.1-201ENST00000449387 391 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 RNU6-914P-201ENST00000516749 109 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 SNORA48.11-201ENST00000517015 89 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC123904.2-201ENST00000548059 300 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC105137.2-201ENST00000569073 466 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MIR4444-1-201ENST00000581696 74 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MIR4444-2-201ENST00000584390 74 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AP000811.1-201ENST00000603803 651 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AP000860.1-201ENST00000605250 559 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC067747.1-201ENST00000608026 250 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC092106.3-201ENST00000611308 722 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 MIR6840-201ENST00000611937 71 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 OR4G3P-201ENST00000633500 913 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.57□□□□□ -2.16
SND1-IT1Q9HBX3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SND1-IT1Q9HBX3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms