Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AL512310.1-201ENST00000548639 172 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC136619.2-201ENST00000563361 631 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC025678.1-201ENST00000567861 338 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 MIR4782-201ENST00000577987 79 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 MIR548AC-201ENST00000585049 88 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AL020997.2-201ENST00000602607 184 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AL021997.1-201ENST00000605757 193 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC092954.2-201ENST00000609103 430 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 MIR3199-2-201ENST00000636243 86 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.9-201ENST00000362354 101 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RNU4-12P-201ENST00000365233 139 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL031779.1-201ENST00000415663 330 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 ATG3P1-201ENST00000419507 911 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL358075.3-201ENST00000426289 226 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC125238.1-201ENST00000448842 249 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 FDX1P2-201ENST00000450769 375 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 SNRPFP3-201ENST00000457792 225 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RNU6-261P-201ENST00000459506 102 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL672167.3-201ENST00000465951 960 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL163973.1-201ENST00000484753 577 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RPS27P26-201ENST00000494583 239 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC019235.1-201ENST00000503847 207 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC092436.1-201ENST00000506450 503 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC106782.4-201ENST00000568264 210 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 MIR5692A1-201ENST00000580523 69 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AL355877.2-201ENST00000603670 358 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC007938.3-201ENST00000604965 623 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
BRF2Q9HAW0 AC093788.1-201ENST00000609356 927 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
BRF2Q9HAW0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNA5SP119-201ENST00000362715 117 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 MIR200C-201ENST00000384980 68 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 MIR134-201ENST00000385258 73 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNU6-780P-201ENST00000391030 104 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RPL5P18-201ENST00000406671 891 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNU6-648P-201ENST00000410190 107 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNA5SP44-201ENST00000410446 133 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 ZNF885P-201ENST00000420174 1098 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AL078601.1-201ENST00000444542 271 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC093392.2-201ENST00000450682 337 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC083798.1-201ENST00000472671 131 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 RNU6-1281P-201ENST00000516223 105 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 SNORA40.12-201ENST00000516329 111 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 SNORA31.19-201ENST00000517079 126 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC025755.1-201ENST00000521306 278 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 AC007458.1-201ENST00000542812 373 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 U6.42-201ENST00000618440 107 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRF2Q9HAW0 ADAM3A-203ENST00000461344 2157 ntBASIC3.11□□□□□ -1.91
BRF2Q9HAW0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC006020.1-201ENST00000420179 1854 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 MIR412-201ENST00000362142 91 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 SNORA69-201ENST00000383895 132 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 USP9YP27-201ENST00000418455 438 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms