Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TUG1_1.1-201ENST00000610654 145 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC093838.1-201ENST00000613014 469 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AL442067.2-201ENST00000614033 363 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 MIR6130-201ENST00000619419 109 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 MIR3688-2-201ENST00000636963 87 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
UPF2Q9HAU5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
UPF2Q9HAU5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.15□□□□□ -1.9
UPF2Q9HAU5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RNU4-12P-201ENST00000365233 139 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.390-201ENST00000383932 102 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RNU1-109P-201ENST00000383960 147 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 MIR1-2-201ENST00000384961 85 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RPS4XP8-201ENST00000402039 771 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 CIR1P3-201ENST00000405137 479 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 FAT1P1-201ENST00000406588 507 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RNU2-8P-201ENST00000410727 190 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 USP9YP20-201ENST00000419224 558 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 ELOCP4-201ENST00000420090 333 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL645937.1-202ENST00000421799 937 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL139415.2-201ENST00000431968 163 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC119618.1-201ENST00000434191 222 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL596276.1-201ENST00000434465 418 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RPS3AP12-201ENST00000443616 753 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL136380.1-201ENST00000447970 162 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 MTCO3P38-201ENST00000468910 766 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RPS29P26-201ENST00000477483 171 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 KC877373.1-201ENST00000479066 408 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 RPS15AP36-201ENST00000492022 382 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.704-201ENST00000516851 102 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 SNORA70.24-201ENST00000517233 118 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 HMGB1P33-201ENST00000563485 527 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC012443.1-201ENST00000605605 231 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AP001596.2-201ENST00000608410 312 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC090970.3-201ENST00000612566 866 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AL603758.1-201ENST00000618654 241 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 MIR8057-201ENST00000620957 69 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC019226.1-201ENST00000625666 515 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 AC093536.2-201ENST00000565257 1406 ntBASIC3.15□□□□□ -1.91
UPF2Q9HAU5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UPF2Q9HAU5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RNU6-108P-201ENST00000365558 107 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 BTF3P7-201ENST00000407097 488 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RNU2-43P-201ENST00000410306 190 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC018630.2-202ENST00000422992 927 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RPL35AP12-201ENST00000425362 338 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 FCF1P1-201ENST00000432690 571 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 MTATP6P30-201ENST00000443540 664 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 FDX1P2-201ENST00000450769 375 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 MTND2P24-201ENST00000453434 806 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RNU6-420P-201ENST00000458780 107 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC007182.2-201ENST00000489251 402 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC069439.1-201ENST00000494739 167 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 CKS1BP7-201ENST00000522230 235 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 OR5AQ1P-201ENST00000527596 927 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC105224.1-201ENST00000587055 421 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 RBM11P1-201ENST00000604951 799 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AL121992.2-201ENST00000606262 256 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AP001330.5-201ENST00000607176 411 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 TUG1_2.1-201ENST00000614234 87 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AL162274.2-201ENST00000614406 332 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 ATP5A1P2-202ENST00000616464 443 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC073534.2-201ENST00000620377 381 ntBASIC3.14□□□□□ -1.91
UPF2Q9HAU5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 AC009812.4-201ENST00000569134 1805 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms