Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC112492.4-201ENST00000456549 352 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RPL23AP24-201ENST00000458203 385 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AC008481.1-201ENST00000463278 396 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS11Q9H270 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS11Q9H270 AC025465.3-201ENST00000510570 311 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AL359273.1-201ENST00000510918 627 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS11Q9H270 RNU6-1023P-201ENST00000516137 106 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RNU7-143P-201ENST00000516781 65 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RNU6-64P-201ENST00000517119 105 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS11Q9H270 AC022080.3-201ENST00000544433 482 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 RRN3P3-201ENST00000549207 578 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS11Q9H270 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VPS11Q9H270 OR4H12P-201ENST00000556269 907 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 ZNF192P1-203ENST00000565888 810 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS11Q9H270 AC024619.4-201ENST00000580924 316 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS11Q9H270 MIR6820-201ENST00000611508 62 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AC103705.1-201ENST00000619013 241 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 MIR7703-201ENST00000620784 77 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 AC244100.1-202ENST00000621554 382 ntBASIC4.08□□□□□ -1.76
VPS11Q9H270 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS11Q9H270 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS11Q9H270 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS11Q9H270 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS11Q9H270 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS11Q9H270 RNVU1-6-201ENST00000364688 164 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS11Q9H270 AC110754.1-201ENST00000399740 601 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AL445189.1-201ENST00000405722 338 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 MIR1290-201ENST00000408735 78 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS11Q9H270 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS11Q9H270 AC068533.1-201ENST00000418542 415 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 MRPS18CP6-201ENST00000423587 223 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AL590632.1-201ENST00000424289 371 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS11Q9H270 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS11Q9H270 OSTCP8-201ENST00000445117 448 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AC016696.1-201ENST00000446949 318 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS11Q9H270 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS11Q9H270 RPL29P14-201ENST00000495837 428 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AC008958.1-201ENST00000511047 682 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 Y_RNA.708-201ENST00000516950 96 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 SNORD116.3-201ENST00000517176 78 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 RNU6-840P-201ENST00000517275 65 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS11Q9H270 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS11Q9H270 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS11Q9H270 MIR3910-1-201ENST00000580936 111 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS11Q9H270 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
VPS11Q9H270 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS11Q9H270 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS11Q9H270 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VPS11Q9H270 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.14-201ENST00000362415 103 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.26-201ENST00000362539 101 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RNU6-774P-201ENST00000363238 107 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 SNORD115-7-201ENST00000365306 82 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.428-201ENST00000384078 102 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.477-201ENST00000384352 108 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.555-201ENST00000384673 110 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 Y_RNA.562-201ENST00000384695 113 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AL445529.1-201ENST00000398713 389 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RPL7P37-201ENST00000425095 738 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC017083.1-201ENST00000428093 483 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC236972.1-201ENST00000433225 199 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 MTND5P15-201ENST00000434246 349 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS11Q9H270 AL500522.2-201ENST00000448562 343 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AL353752.1-201ENST00000454946 260 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 FO393415.2-201ENST00000480085 343 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC022493.2-201ENST00000506122 481 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 GMPSP1-201ENST00000514075 579 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RNU6-475P-201ENST00000516073 104 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RNA5SP384-201ENST00000516615 116 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS11Q9H270 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS11Q9H270 AC022968.1-201ENST00000567372 442 ntBASIC4.06□□□□□ -1.76
VPS11Q9H270 RPL23AP84-201ENST00000571193 464 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms