Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL021997.1-201ENST00000605757 193 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC063944.3-201ENST00000609969 533 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AC007490.1-201ENST00000624321 703 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPAS2Q99743 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPAS2Q99743 RNU6-817P-201ENST00000391083 104 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC119751.3-201ENST00000399720 670 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC011233.1-201ENST00000422812 283 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AL022400.1-201ENST00000423946 935 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC073901.1-201ENST00000462471 408 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC008413.1-201ENST00000511864 177 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.29□□□□□ -2.04
NPAS2Q99743 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AP006587.4-201ENST00000526053 529 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AL353778.1-201ENST00000603149 408 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC112187.2-201ENST00000604345 283 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC090970.3-201ENST00000612566 866 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 AL160394.1-201ENST00000624765 724 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 AC017037.3-201ENST00000625016 472 ntBASIC2.29□□□□□ -2.04
NPAS2Q99743 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPAS2Q99743 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS2Q99743 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NPAS2Q99743 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPAS2Q99743 OR5H15-201ENST00000383696 930 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NPAS2Q99743 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NPAS2Q99743 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 USP9YP6-201ENST00000413550 854 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 HMGB1P11-201ENST00000413899 637 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.28□□□□□ -2.04
NPAS2Q99743 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.28□□□□□ -2.04
NPAS2Q99743 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS2Q99743 TIMM9P1-201ENST00000436122 256 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AL354941.1-201ENST00000438600 464 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.28□□□□□ -2.04
NPAS2Q99743 MTND2P14-201ENST00000482139 351 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 MRPL42P6-201ENST00000486397 371 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS2Q99743 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NPAS2Q99743 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
NPAS2Q99743 Y_RNA.717-201ENST00000517106 92 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS2Q99743 MTATP6P15-201ENST00000527233 835 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AP003461.1-201ENST00000528866 78 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.28□□□□□ -2.04
NPAS2Q99743 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS2Q99743 MIR3167-201ENST00000579623 85 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 MIR4999-201ENST00000585029 91 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AC069294.1-201ENST00000608397 350 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AL590808.1-201ENST00000618696 141 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 AC025034.2-201ENST00000623264 286 ntBASIC2.28□□□□□ -2.04
NPAS2Q99743 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPAS2Q99743 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.05
NPAS2Q99743 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
NPAS2Q99743 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS2Q99743 MTND4P16-201ENST00000466108 1367 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS2Q99743 AL391994.1-201ENST00000254724 282 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 U6atac.2-201ENST00000408644 118 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 PTGES3P4-201ENST00000426243 356 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS2Q99743 MTND1P20-201ENST00000430341 950 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AL139109.1-201ENST00000455491 297 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AC008549.1-201ENST00000512900 643 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 LRRC34P1-201ENST00000542742 915 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 ELOCP32-201ENST00000548625 324 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 ZNF321P-202ENST00000550843 495 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AL121821.2-201ENST00000556081 394 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
NPAS2Q99743 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS2Q99743 MIR4765-201ENST00000585007 77 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms