Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 GMPSP1-201ENST00000514075 579 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 RNU6-120P-201ENST00000516077 103 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.52□□□□□ -1.85
TIMP4Q99727 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.52□□□□□ -1.85
TIMP4Q99727 AL117187.1-201ENST00000555482 181 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.52□□□□□ -1.85
TIMP4Q99727 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.52□□□□□ -1.85
TIMP4Q99727 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 AC087588.2-201ENST00000617667 426 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 AC022418.1-201ENST00000624118 445 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TIMP4Q99727 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.52□□□□□ -1.85
TIMP4Q99727 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 ZNF807-201ENST00000328088 1707 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 CDC27P3-201ENST00000635418 1910 ntBASIC3.52□□□□□ -1.85
TIMP4Q99727 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TIMP4Q99727 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 AL356489.2-201ENST00000566968 3528 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-1303P-201ENST00000364841 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-1032P-201ENST00000384100 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-45P-201ENST00000384471 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 SNORD3H-201ENST00000384486 214 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-95P-201ENST00000384697 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-331P-201ENST00000384724 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 MIR23B-201ENST00000384832 97 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-837P-201ENST00000391056 108 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 RN7SKP156-201ENST00000410308 342 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.51□□□□□ -1.85
TIMP4Q99727 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.51□□□□□ -1.85
TIMP4Q99727 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.51□□□□□ -1.85
TIMP4Q99727 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
TIMP4Q99727 AC018865.2-201ENST00000423631 129 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 RPL21P23-201ENST00000446654 460 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.51□□□□□ -1.85
TIMP4Q99727 RNU6-953P-201ENST00000459154 107 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC009901.1-201ENST00000506703 541 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC104136.1-201ENST00000512969 394 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 SNORA25.10-201ENST00000515926 124 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC087369.1-201ENST00000520775 996 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 CYCSP27-201ENST00000527643 293 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 MTCO3P23-201ENST00000561363 289 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC005951.2-201ENST00000576282 495 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 AC018462.2-201ENST00000605375 395 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC002044.1-201ENST00000606707 158 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 CR392039.5-201ENST00000623201 510 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC006065.5-201ENST00000623427 349 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
TIMP4Q99727 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TIMP4Q99727 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TIMP4Q99727 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
TIMP4Q99727 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TIMP4Q99727 Y_RNA.2-201ENST00000362330 96 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TIMP4Q99727 RNU6-214P-201ENST00000384130 107 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 RNU6-882P-201ENST00000391025 103 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.5□□□□□ -1.85
TIMP4Q99727 RPL21P90-201ENST00000415692 466 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 RANP8-201ENST00000444720 713 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 SLC25A15P5-201ENST00000508033 253 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AC096745.1-201ENST00000509945 370 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 FTH1P9-201ENST00000513251 355 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 RNU6-764P-201ENST00000516396 105 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 RNU6-699P-201ENST00000517081 110 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AC087854.1-201ENST00000519706 414 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 MIR4429-201ENST00000580105 73 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 MIR3149-201ENST00000584629 83 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.5□□□□□ -1.85
TIMP4Q99727 RNA5SP108-201ENST00000605921 117 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 MIR15A-201ENST00000607334 83 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AC090425.1-201ENST00000610007 140 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AL162373.1-201ENST00000620433 407 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 PLCE1P1-201ENST00000622094 305 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 AC039056.2-201ENST00000622261 511 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.5□□□□□ -1.85
TIMP4Q99727 MAPK10-372ENST00000641954 3413 ntBASIC3.5□□□□□ -1.85
TIMP4Q99727 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
TIMP4Q99727 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
TIMP4Q99727 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.5□□□□□ -1.85
TIMP4Q99727 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms