Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC084198.1-201ENST00000477747 402 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 RPL31P60-201ENST00000478450 367 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 MTND5P5-201ENST00000503764 376 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC009901.1-201ENST00000506703 541 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 SNORA14.1-201ENST00000516113 141 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 RNU6-914P-201ENST00000516749 109 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 RNA5SP179-201ENST00000517284 121 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AP005639.2-201ENST00000527592 928 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC138761.3-201ENST00000579993 334 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 MIR5692C1-201ENST00000585309 91 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC023043.2-201ENST00000589678 1026 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC091167.4-201ENST00000605079 184 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 BRDTP1-201ENST00000605735 677 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 FAM157A-202ENST00000615155 405 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 MIR8058-201ENST00000615737 89 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 AC090971.5-201ENST00000621102 293 ntBASIC3.47□□□□□ -1.85
SNX18Q96RF0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX18Q96RF0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SNX18Q96RF0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SNX18Q96RF0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX18Q96RF0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SNX18Q96RF0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SNX18Q96RF0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.85
SNX18Q96RF0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SNX18Q96RF0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX18Q96RF0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX18Q96RF0 RNU6-43P-201ENST00000384302 107 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 RNU6-370P-201ENST00000411008 104 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AL139396.1-201ENST00000421137 167 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 RPL27AP8-201ENST00000424277 446 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AL691449.1-201ENST00000426570 421 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 BRK1P2-201ENST00000442875 223 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC104472.2-201ENST00000469035 601 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC087884.1-201ENST00000469738 328 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC117503.1-201ENST00000472241 394 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 RPS27P27-201ENST00000498779 255 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 SNORA70.16-201ENST00000516390 95 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC120057.2-201ENST00000571520 271 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 RN7SL703P-201ENST00000578485 302 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 MIR4429-201ENST00000580105 73 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 MIR3941-201ENST00000582572 103 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC012119.1-201ENST00000603184 222 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 MIR6500-201ENST00000622700 86 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC022418.1-201ENST00000624118 445 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.46□□□□□ -1.86
SNX18Q96RF0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX18Q96RF0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX18Q96RF0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 SNORA31-201ENST00000362607 130 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNU6-512P-201ENST00000364438 103 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 SNORD116-11-201ENST00000383882 92 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNU6-45P-201ENST00000384471 107 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNY4P36-201ENST00000391116 96 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 MRPS31P2-201ENST00000451581 518 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RPL21P41-201ENST00000459863 264 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 HMGN1P10-201ENST00000474557 553 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC027575.1-201ENST00000481064 460 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RPS15AP34-201ENST00000487776 387 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC008526.1-201ENST00000509149 338 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC104136.1-201ENST00000512969 394 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 APOOP4-201ENST00000513530 597 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNU6-1170P-201ENST00000515974 106 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNA5SP164-201ENST00000516533 110 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms