Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RNU1-44P-201ENST00000384453 163 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 MIR625-201ENST00000385047 85 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RBMY1KP-201ENST00000423480 476 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AC090774.1-201ENST00000435925 246 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AC073910.1-201ENST00000445047 438 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RPL39P38-201ENST00000467018 153 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RNU7-4P-201ENST00000516961 62 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 OR5D17P-201ENST00000531492 978 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 MIR4716-201ENST00000579628 84 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 MIR7154-201ENST00000620673 73 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MIR628-201ENST00000385229 95 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 AL030996.1-201ENST00000411430 235 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 PRDX3P3-201ENST00000447765 522 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 SNORA25.11-201ENST00000515935 105 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.687-201ENST00000516558 91 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 RN7SKP258-201ENST00000517151 304 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 AC008694.2-201ENST00000517591 306 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 IFITM8P-201ENST00000522529 394 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MIR5195-201ENST00000583555 115 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 RPS29P30-201ENST00000600975 111 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 RAC1P9-201ENST00000604990 392 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MIR3976-201ENST00000606807 139 ntBASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNGAP1Q96PV0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 MIR578-201ENST00000384828 96 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-817P-201ENST00000391083 104 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-712P-201ENST00000410558 100 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 MIR1911-201ENST00000410783 80 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC092423.1-201ENST00000430165 186 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 CYCSP32-201ENST00000440548 321 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 MTND4LP30-201ENST00000454092 297 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RN7SL429P-201ENST00000479090 223 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RN7SL489P-201ENST00000486185 223 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RPS15AP34-201ENST00000487776 387 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RN7SL327P-201ENST00000488659 223 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC144568.1-201ENST00000520139 137 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 SNRPGP16-201ENST00000533275 226 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AMZ2P1-203ENST00000565833 850 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 MTND6P33-201ENST00000571794 183 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AL591516.1-201ENST00000611326 274 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AC005344.1-201ENST00000613391 459 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 RN7SL853P-201ENST00000617250 223 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 DDX18P3-201ENST00000404856 2007 ntBASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SYNGAP1Q96PV0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms