Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MIR4435-1-201ENST00000582552 80 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC011939.3-201ENST00000613686 466 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 MTND5P42-201ENST00000637720 498 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC135776.4-201ENST00000624300 1904 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 SMIM11P1-201ENST00000369586 178 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 Z99497.1-201ENST00000421282 135 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 RPS12P2-201ENST00000439728 269 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 BRK1P2-201ENST00000442875 223 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 MTND1P3-201ENST00000484956 952 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 RPS15AP34-201ENST00000487776 387 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC139453.3-201ENST00000493276 369 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC005178.1-201ENST00000508392 440 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AF131216.2-201ENST00000512316 564 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF560Q96MR9 MIR5697-201ENST00000578045 78 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC024619.4-201ENST00000580924 316 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC105129.3-201ENST00000605455 485 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC018638.7-201ENST00000605836 1114 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 RNU6-87P-201ENST00000607561 108 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC092140.2-201ENST00000618027 521 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
ZNF560Q96MR9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC004520.1-201ENST00000608362 1413 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 RNU6-658P-201ENST00000384606 106 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 SNORA67.4-201ENST00000384688 142 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC009963.1-201ENST00000417265 157 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AL592045.1-201ENST00000429867 352 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC004263.1-201ENST00000479327 332 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC006199.1-201ENST00000548728 219 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC012435.1-202ENST00000568772 240 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AL031775.1-201ENST00000607014 887 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC138749.5-201ENST00000611461 208 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC116165.2-201ENST00000616705 206 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AL589994.2-201ENST00000621124 579 ntBASIC2.61□□□□□ -1.99
ZNF560Q96MR9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
ZNF560Q96MR9 AC016717.2-201ENST00000609089 5141 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 ADAM3A-203ENST00000461344 2157 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 RNU6-288P-201ENST00000363690 104 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 SNORA41-201ENST00000384675 132 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL445529.1-201ENST00000398713 389 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 MTCYBP36-201ENST00000404146 440 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL139413.1-201ENST00000421309 217 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 ZNF114P1-201ENST00000453500 292 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 EIF4EP3-201ENST00000498782 656 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AP003122.3-201ENST00000526316 255 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC084851.1-201ENST00000529105 249 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AP002770.2-201ENST00000543613 532 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL512310.1-201ENST00000548639 172 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 MTATP6P24-201ENST00000576835 677 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC005261.5-201ENST00000596280 355 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AL355816.2-201ENST00000610049 647 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC027807.2-201ENST00000616099 408 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC009878.1-201ENST00000621819 340 ntBASIC2.6□□□□□ -1.99
ZNF560Q96MR9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms