Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 MIR3921-201ENST00000577308 85 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 BNIP3P25-201ENST00000596023 559 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC005261.5-201ENST00000596280 355 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC098826.3-201ENST00000603823 466 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC013553.2-201ENST00000604244 589 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AP002826.1-201ENST00000608835 315 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC107294.3-201ENST00000609211 526 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL110115.1-201ENST00000614396 364 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC012442.3-202ENST00000636742 206 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 ZNF285B-201ENST00000561698 1767 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 RNU6-694P-201ENST00000364071 147 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 Y_RNA.263-201ENST00000364659 114 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 Y_RNA.356-201ENST00000365475 113 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 SNORA4.3-201ENST00000365564 137 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AL592114.1-201ENST00000403842 483 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC009161.1-201ENST00000417306 376 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AL669831.1-202ENST00000428504 417 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AL592045.1-201ENST00000429867 352 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 HSPD1P21-201ENST00000436541 245 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 IFNA20P-201ENST00000436840 528 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 GTF2IP13-201ENST00000438487 386 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC093019.1-201ENST00000443135 252 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 MRPL50P4-201ENST00000446432 475 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 RNU6-1208P-201ENST00000459588 107 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 RN7SL442P-201ENST00000473804 320 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC110768.1-201ENST00000509222 400 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 FAM206BP-201ENST00000510179 541 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 APOOP4-201ENST00000513530 597 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 RNA5SP380-201ENST00000517190 98 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 RPS3AP23-202ENST00000574601 686 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 U3.45-201ENST00000607547 219 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC009570.1-201ENST00000609599 745 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC073544.1-201ENST00000600110 1595 ntBASIC3.53□□□□□ -1.84
VPS50Q96JG6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS50Q96JG6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS50Q96JG6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS50Q96JG6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS50Q96JG6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS50Q96JG6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 Y_RNA.61-201ENST00000362835 102 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 U3.12-201ENST00000364498 214 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 RNA5SP424-201ENST00000390988 115 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AL122016.1-201ENST00000403365 367 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 BX682237.1-201ENST00000415016 335 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC007919.1-201ENST00000429380 217 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 RPS24P13-201ENST00000442520 397 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC125238.1-201ENST00000448842 249 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 RNU7-66P-201ENST00000459469 62 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC087588.1-201ENST00000462203 316 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC034236.1-201ENST00000469891 373 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 RAC1P2-201ENST00000511164 579 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 TBCAP3-201ENST00000512475 312 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 AP001804.3-201ENST00000525146 880 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 OR11H5P-201ENST00000554039 926 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC026464.5-201ENST00000562497 722 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 MIR4742-201ENST00000581069 85 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC092747.3-201ENST00000603769 301 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms