Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 PMCHL2-203ENST00000457791 237 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AP002884.2-201ENST00000471647 395 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 RPS15AP34-201ENST00000487776 387 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 FCF1P8-201ENST00000510322 597 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC010486.1-201ENST00000511793 424 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 SNORA31.1-201ENST00000515993 133 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 SNORA31.5-201ENST00000516190 133 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AL118558.2-201ENST00000556294 238 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC027309.3-201ENST00000623419 351 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 MIR7153-201ENST00000637758 57 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 AC007785.2-201ENST00000598627 1916 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 MTND4P35-201ENST00000604257 1375 ntBASIC3.85□□□□□ -1.79
CDK5RAP3Q96JB5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.70-201ENST00000362886 110 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.279-201ENST00000364763 95 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 SNORA4.3-201ENST00000365564 137 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.373-201ENST00000365600 103 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 SNORD70.1-201ENST00000391007 85 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 EEF1A1P40-201ENST00000412883 573 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC126124.2-201ENST00000413542 321 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC008264.1-201ENST00000447612 367 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 RPS15AP27-201ENST00000449183 343 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AL590639.1-201ENST00000456484 337 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 RPL32P34-201ENST00000486380 400 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC006445.2-201ENST00000510061 472 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-507P-201ENST00000516045 100 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 TRAV28-201ENST00000557548 323 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 AC063943.3-201ENST00000615562 356 ntBASIC3.84□□□□□ -1.79
CDK5RAP3Q96JB5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.84□□□□□ -1.8
CDK5RAP3Q96JB5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
CDK5RAP3Q96JB5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-715P-201ENST00000365204 103 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 Y_RNA.378-201ENST00000365652 113 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 SNORA32.2-201ENST00000384049 122 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 SNORD17-201ENST00000390930 237 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 GPM6BP2-201ENST00000432046 144 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 USP9YP8-201ENST00000441913 500 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 RPS24P13-201ENST00000442520 397 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 GPM6BP1-201ENST00000446387 144 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 AL671855.1-201ENST00000446875 1203 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 RPL30P5-201ENST00000494923 336 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 HMGN1P12-201ENST00000499125 195 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 SUMO2P6-201ENST00000505273 288 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 SNORD59.2-201ENST00000516873 68 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 BTF3P12-201ENST00000519620 469 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 MTND4P12-201ENST00000498999 1377 ntBASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDK5RAP3Q96JB5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 CBX3P1-201ENST00000325243 554 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 RNA5SP50-201ENST00000363731 107 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-393P-201ENST00000384475 107 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC063979.1-201ENST00000415539 377 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AL356968.1-201ENST00000416622 474 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 ARL5AP1-201ENST00000418991 388 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AP000907.1-201ENST00000428428 510 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms