Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 BRK1P2-201ENST00000442875 223 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 Z83846.1-201ENST00000446798 265 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC108078.2-201ENST00000510750 236 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RNU6-572P-201ENST00000516724 80 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SNORD19.2-201ENST00000516978 73 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC025755.1-201ENST00000521306 278 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC060788.1-201ENST00000521318 469 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SEPT7P9-203ENST00000604116 343 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 MIR15A-201ENST00000607334 83 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL591516.1-201ENST00000611326 274 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC091304.9-201ENST00000612091 226 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AP001506.1-201ENST00000615444 211 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC007318.2-201ENST00000620999 243 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL359757.2-201ENST00000624309 274 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 PISRT1-201ENST00000626175 531 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 TEX21P-201ENST00000447107 1476 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MIR148B-201ENST00000362252 99 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNA5SP432-201ENST00000362480 116 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU4-91P-201ENST00000364778 135 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU6-19P-201ENST00000384718 107 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MIR558-201ENST00000384920 94 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MIR1261-201ENST00000408659 82 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL109913.1-201ENST00000421173 514 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC104850.1-201ENST00000435940 476 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 PGBD4P3-201ENST00000440731 581 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MTND2P4-201ENST00000445034 1004 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL441985.1-201ENST00000457727 251 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNA5SP269-201ENST00000459032 137 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC109927.2-201ENST00000506416 303 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU1-143P-201ENST00000516296 146 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC022616.3-201ENST00000523940 148 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL356057.1-201ENST00000533798 831 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC079600.2-201ENST00000550076 130 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC087883.1-201ENST00000551882 391 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL157871.3-201ENST00000557231 293 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC012414.6-201ENST00000568241 401 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC024153.1-201ENST00000603103 365 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC015871.2-201ENST00000603605 948 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL451064.1-201ENST00000607718 471 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 U1.23-201ENST00000610293 146 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC073114.1-201ENST00000612027 490 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 RNU1-68P-201ENST00000615382 146 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 U1.39-201ENST00000621562 146 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL603839.4-201ENST00000624658 1005 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 MTND5P27-201ENST00000428871 1720 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP40Q96DI7 AC096644.4-201ENST00000563417 2912 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms