Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC091953.5-201ENST00000622919 233 ntBASIC4.05□□□□□ -1.76
CHMP4CQ96CF2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.05□□□□□ -1.76
CHMP4CQ96CF2 SRP72P2-201ENST00000344851 1979 ntBASIC4.05□□□□□ -1.76
CHMP4CQ96CF2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.05□□□□□ -1.76
CHMP4CQ96CF2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHMP4CQ96CF2 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL359693.1-201ENST00000614959 2407 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 EI24P2-201ENST00000397776 1076 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC126124.2-201ENST00000413542 321 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 MRPS31P2-201ENST00000451581 518 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 RPS4XP2-201ENST00000458402 793 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC006445.2-201ENST00000510061 472 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 RNA5SP165-201ENST00000517142 115 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 RNU6-1315P-201ENST00000517187 99 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 MTND4P7-201ENST00000523876 130 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 SUB1P1-201ENST00000524415 382 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL137161.1-201ENST00000532231 390 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC011602.1-201ENST00000546484 331 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC015917.1-201ENST00000579654 510 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL020991.1-201ENST00000612314 373 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 uc_338.34-201ENST00000617467 174 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC093010.3-201ENST00000570269 15214 ntBASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHMP4CQ96CF2 AL136164.4-201ENST00000625013 2135 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RNA5SP72-201ENST00000364442 117 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RNU2-68P-201ENST00000410878 191 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AC063979.1-201ENST00000415539 377 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 SNRPEP9-201ENST00000436794 238 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RBMX2P4-201ENST00000441256 376 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RPL32P34-201ENST00000486380 400 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 RPL38P4-201ENST00000502376 214 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 PRDX4P1-201ENST00000507189 574 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 HMGB1P14-201ENST00000557424 591 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 MIR3609-201ENST00000582661 80 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AC004805.2-201ENST00000605382 482 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 AC073476.4-201ENST00000628409 72 ntBASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHMP4CQ96CF2 OR4G1P-203ENST00000641984 1631 ntBASIC4.03□□□□□ -1.77
CHMP4CQ96CF2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 MIR30E-201ENST00000362104 92 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP267-201ENST00000364893 126 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RNU4-66P-201ENST00000365199 138 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 SNORA4.3-201ENST00000365564 137 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RNU6-217P-201ENST00000384164 104 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP31-201ENST00000411144 127 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RPL31P12-201ENST00000422587 358 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RNU7-180P-201ENST00000459240 63 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RPL23AP11-201ENST00000475260 469 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 SUMO2P6-201ENST00000505273 288 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 FCF1P8-201ENST00000510322 597 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 SNORA70.24-201ENST00000517233 118 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AL157871.3-201ENST00000557231 293 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms