Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 MTND3P21-201ENST00000433774 331 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AL118520.1-201ENST00000450770 291 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC139453.3-201ENST00000493276 369 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC093663.1-201ENST00000497190 394 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 SUMO2P6-201ENST00000505273 288 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC011352.1-201ENST00000512300 793 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RNA5SP401-201ENST00000515920 127 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 IGKV2-26-201ENST00000518305 343 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 ZNF519P2-201ENST00000557032 169 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC019159.1-201ENST00000605094 187 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC092794.1-201ENST00000612734 582 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC090517.2-201ENST00000614966 680 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AL160394.1-201ENST00000624765 724 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.88
SH3KBP1Q96B97 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MIR30E-201ENST00000362104 92 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RNU6-270P-201ENST00000364131 105 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RNU6-1322P-201ENST00000364309 107 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 SNORA69-201ENST00000383895 132 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RN7SKP220-201ENST00000410611 288 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RNA5SP120-201ENST00000410900 112 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 USP9YP27-201ENST00000418455 438 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MTCO1P20-201ENST00000425366 358 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 TIMM9P3-201ENST00000428659 274 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 UBE2V1P8-201ENST00000437166 265 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RPS24P13-201ENST00000442520 397 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 snoU13.28-201ENST00000459235 104 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RPS15AP34-201ENST00000487776 387 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 RNU6-1281P-201ENST00000516223 105 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MTND1P5-201ENST00000517906 940 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MTND1P35-201ENST00000526739 508 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 OR5AQ1P-201ENST00000527596 927 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 U4.5-201ENST00000617137 123 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 SNORD39.4-201ENST00000620099 78 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AC005609.4-201ENST00000625071 447 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
SH3KBP1Q96B97 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC103710.2-202ENST00000641454 2853 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.9-201ENST00000362354 101 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 SNORA38.1-201ENST00000364172 131 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 RNU6-217P-201ENST00000384164 104 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.481-201ENST00000384373 102 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 SNORD37.1-201ENST00000390968 65 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 RNA5SP354-201ENST00000391247 136 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 Z92545.1-201ENST00000411782 234 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC099548.1-201ENST00000421443 426 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC016691.1-201ENST00000441321 413 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC008155.2-201ENST00000464337 397 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC126182.1-201ENST00000478134 357 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC110794.1-201ENST00000505816 425 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC117522.3-201ENST00000507974 584 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms