Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MTND1P27-201ENST00000451117 902 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC092001.1-201ENST00000453012 261 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 BTF3P15-201ENST00000455606 336 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 Y_RNA.695-201ENST00000516715 107 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 OR5BN1P-201ENST00000532955 829 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MIR5680-201ENST00000577577 84 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MIR3158-1-201ENST00000583596 81 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL121992.2-201ENST00000606262 256 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC026422.1-201ENST00000623961 452 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL157786.1-207ENST00000627771 695 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MIR7157-201ENST00000635801 60 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AC009487.2-201ENST00000420969 6821 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MIR412-201ENST00000362142 91 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RNU6-1097P-201ENST00000363586 107 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 Y_RNA.201-201ENST00000364052 96 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MIR518D-201ENST00000385014 87 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MIR147B-201ENST00000390185 80 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 C1DP2-201ENST00000418167 426 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 CALM2P2-201ENST00000428512 440 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MTATP6P16-201ENST00000434543 526 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MTND2P4-201ENST00000445034 1004 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AL441985.1-201ENST00000457727 251 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 snoU13.22-201ENST00000459428 104 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC091965.2-201ENST00000512324 613 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 BTF3P12-201ENST00000519620 469 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MTND2P38-201ENST00000522536 667 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AP001646.1-201ENST00000527936 915 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MIR548AC-201ENST00000585049 88 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC098848.2-201ENST00000588023 330 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC087752.4-201ENST00000605911 462 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 MIR98-201ENST00000606724 119 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 OR2AS2P-201ENST00000606902 342 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC126118.1-201ENST00000607744 628 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC006133.1-201ENST00000617106 264 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 Z69908.1-201ENST00000622603 247 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC025034.2-201ENST00000623264 286 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC080128.1-201ENST00000474389 1917 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 AC135776.4-201ENST00000624300 1904 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS33AQ96AX1 ELL2P3-201ENST00000457883 1602 ntBASIC2.79□□□□□ -1.96
VPS33AQ96AX1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 CISD1P1-201ENST00000393907 327 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 HMGN2P35-201ENST00000412164 270 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RPL31P35-201ENST00000431058 377 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC244505.5-201ENST00000443639 207 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RPL9P33-201ENST00000484311 566 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 EIF4EP3-201ENST00000498782 656 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC116655.1-201ENST00000508324 901 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms