Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNA5SP165-201ENST00000517142 115 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.85□□□□□ -1.79
HPS3Q969F9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 IGHV3-76-201ENST00000522465 295 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AL157871.3-201ENST00000557231 293 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 MIR5583-1-201ENST00000580941 59 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 MIR3941-201ENST00000582572 103 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AC011712.1-201ENST00000588959 234 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
HPS3Q969F9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HPS3Q969F9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HPS3Q969F9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.84□□□□□ -1.79
HPS3Q969F9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HPS3Q969F9 MIR30E-201ENST00000362104 92 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 Y_RNA.100-201ENST00000363141 102 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HPS3Q969F9 AL162578.1-201ENST00000406202 378 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.84□□□□□ -1.79
HPS3Q969F9 AC012498.1-201ENST00000424037 437 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 CYCSP4-201ENST00000429682 331 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC073063.1-201ENST00000434352 607 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 SNRPEP9-201ENST00000436794 238 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC098614.3-201ENST00000438957 440 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS3Q969F9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.84□□□□□ -1.79
HPS3Q969F9 MTCO3P9-201ENST00000506989 781 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC079140.5-201ENST00000507882 310 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC010486.1-201ENST00000511793 424 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 MIR2276-201ENST00000516886 89 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AP003122.3-201ENST00000526316 255 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC084851.1-201ENST00000529105 249 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS3Q969F9 HMGB1P14-201ENST00000557424 591 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.84□□□□□ -1.79
HPS3Q969F9 AC005730.3-201ENST00000583067 366 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 SRGNP1-201ENST00000603392 451 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC004805.2-201ENST00000605382 482 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 SNORD39.4-201ENST00000620099 78 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 AC099506.2-201ENST00000623074 221 ntBASIC3.84□□□□□ -1.79
HPS3Q969F9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HPS3Q969F9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS3Q969F9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HPS3Q969F9 AC058791.1-201ENST00000608412 3198 ntBASIC3.84□□□□□ -1.8
HPS3Q969F9 AL136164.4-201ENST00000625013 2135 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS3Q969F9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS3Q969F9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HPS3Q969F9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC118273.1-201ENST00000525324 3006 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS3Q969F9 RNA5SP197-201ENST00000363357 119 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 RNU6-867P-201ENST00000364956 107 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS3Q969F9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 RNU6-45P-201ENST00000384471 107 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 MIR591-201ENST00000385290 95 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 SNORD17-201ENST00000390930 237 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 RPL21P90-201ENST00000415692 466 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 MTND5P20-201ENST00000448677 143 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS3Q969F9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS3Q969F9 RNU6-1208P-201ENST00000459588 107 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 AL135752.1-201ENST00000479477 471 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 AC114786.4-201ENST00000508771 728 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS3Q969F9 RNU6-1038P-201ENST00000516516 104 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC092807.2-201ENST00000609367 243 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 AP003400.5-201ENST00000624827 617 ntBASIC3.83□□□□□ -1.8
HPS3Q969F9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
HPS3Q969F9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS3Q969F9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.82□□□□□ -1.8
HPS3Q969F9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AL513302.2-201ENST00000562313 1842 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.82□□□□□ -1.8
HPS3Q969F9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.82□□□□□ -1.8
HPS3Q969F9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HPS3Q969F9 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 RNU6-371P-201ENST00000364283 108 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 RNA5SP72-201ENST00000364442 117 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 RNU6-217P-201ENST00000384164 104 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HPS3Q969F9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HPS3Q969F9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AL357552.1-201ENST00000445254 415 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AL590664.1-201ENST00000448065 339 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AL590639.1-201ENST00000456484 337 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms