Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-307P-201ENST00000516743 106 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU6-699P-201ENST00000517081 110 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 AP004371.1-201ENST00000525240 214 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF1Q92994 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 OR8R1P-201ENST00000543943 764 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF1Q92994 RN7SL703P-201ENST00000578485 302 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC005899.2-201ENST00000584353 90 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 MIR3149-201ENST00000584629 83 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 MIR548AC-201ENST00000585049 88 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC020914.4-201ENST00000597690 277 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC006157.1-201ENST00000611750 366 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AL162373.1-201ENST00000620433 407 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.47□□□□□ -1.69
BRF1Q92994 BMS1P21-201ENST00000634565 365 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BRF1Q92994 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF1Q92994 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF1Q92994 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF1Q92994 AC006504.1-201ENST00000562493 3666 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF1Q92994 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRF1Q92994 DEFB108F-201ENST00000344638 222 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 SNORA41-201ENST00000384675 132 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 MIR578-201ENST00000384828 96 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF1Q92994 RPL12P25-201ENST00000455592 494 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 SNORD108-201ENST00000459332 71 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 AC128713.1-201ENST00000471495 306 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 RPS15AP34-201ENST00000487776 387 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF1Q92994 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF1Q92994 Y_RNA.661-201ENST00000516003 99 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 RNA5SP384-201ENST00000516615 116 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF1Q92994 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF1Q92994 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF1Q92994 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF1Q92994 AC053481.4-201ENST00000583164 216 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 7SK.7-201ENST00000603504 247 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 SNORA62.6-201ENST00000606322 83 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 AC005344.1-201ENST00000613391 459 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF1Q92994 AC119674.1-207ENST00000641355 633 ntBASIC4.46□□□□□ -1.7
BRF1Q92994 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
BRF1Q92994 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF1Q92994 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
BRF1Q92994 RNU6-629P-201ENST00000384061 103 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 RNU6-306P-201ENST00000384617 107 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AC063979.1-201ENST00000415539 377 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AL353621.1-201ENST00000418219 243 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF1Q92994 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.45□□□□□ -1.7
BRF1Q92994 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF1Q92994 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF1Q92994 MTND3P25-201ENST00000509243 135 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AC008716.1-201ENST00000511084 513 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 SCARNA16.2-201ENST00000516520 172 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF1Q92994 FAM60BP-201ENST00000578364 658 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF1Q92994 ELOCP5-201ENST00000604924 333 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF1Q92994 AC005014.2-201ENST00000607795 599 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 AC068724.3-201ENST00000625906 87 ntBASIC4.45□□□□□ -1.7
BRF1Q92994 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BRF1Q92994 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF1Q92994 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF1Q92994 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
BRF1Q92994 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF1Q92994 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF1Q92994 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 UBE2L2-201ENST00000254302 429 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 RNU5A-1-201ENST00000362698 116 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 Y_RNA.149-201ENST00000363558 117 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 RNU6-335P-201ENST00000364563 113 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 RNA5SP235-201ENST00000365411 114 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
BRF1Q92994 Y_RNA.428-201ENST00000384078 102 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 MIR30B-201ENST00000384850 88 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms