Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RAB9AP1-201ENST00000449393 573 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MTATP6P7-201ENST00000453315 681 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNU6-333P-201ENST00000459117 107 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL133162.1-201ENST00000463228 453 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RPL21P13-201ENST00000488305 481 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 HMGB1P30-201ENST00000492455 606 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 CCDC34P1-201ENST00000507441 517 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNU6-703P-201ENST00000516946 107 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MIR4429-201ENST00000580105 73 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 U2.17-201ENST00000611454 95 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RMST_3.1-201ENST00000611651 109 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL020991.1-201ENST00000612314 373 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AP003400.5-201ENST00000624827 617 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AP000553.6-201ENST00000641242 118 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SNORA73.2-201ENST00000364946 201 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 U8.11-201ENST00000384699 133 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 U8.12-201ENST00000384701 133 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SNORA16.2-201ENST00000390991 127 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP118-201ENST00000410385 109 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC093578.1-201ENST00000415219 368 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 ARL5AP1-201ENST00000418991 388 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 VN1R34P-201ENST00000447387 883 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 U8.18-201ENST00000459285 133 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RPL31P58-201ENST00000469001 379 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC128713.1-201ENST00000471495 306 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RPS29P25-201ENST00000481709 171 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RPS29P20-201ENST00000489592 171 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RPS27AP10-201ENST00000496103 208 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 RNU2-69P-201ENST00000516061 100 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 MTCO3P24-201ENST00000572729 782 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 MIR4782-201ENST00000577987 79 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC073539.2-201ENST00000597113 165 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC012119.1-201ENST00000603184 222 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC012468.1-201ENST00000604888 430 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 MIR92B-201ENST00000607575 96 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AL161629.2-201ENST00000615347 275 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC022418.1-201ENST00000624118 445 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AC012442.3-202ENST00000636742 206 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 AL513302.2-201ENST00000562313 1842 ntBASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RAB40AQ8WXH6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC010680.1-201ENST00000590024 3590 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 SNORD3E-201ENST00000362899 217 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RNU1-101P-201ENST00000391171 127 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AC073063.1-201ENST00000434352 607 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 RBMX2P4-201ENST00000441256 376 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
RAB40AQ8WXH6 PRPS1P1-201ENST00000445305 876 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms