Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 RNU6-704P-201ENST00000364162 103 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 RNVU1-14-201ENST00000384770 164 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 MTND3P9-201ENST00000429526 346 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AL442163.3-201ENST00000554110 156 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 MIR5696-201ENST00000578474 85 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AC009314.1-201ENST00000603871 304 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AC116447.1-201ENST00000613153 453 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 AC243829.7-201ENST00000633081 225 ntBASIC7.54□□□□□ -1.2
TRIM41Q8WV44 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM41Q8WV44 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 MIR128-1-201ENST00000384921 82 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 RNU4-78P-201ENST00000410940 126 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 U8.21-201ENST00000459536 136 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 AC022559.1-201ENST00000520905 205 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 Y_RNA.772-201ENST00000606692 102 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 AL596275.2-204ENST00000641628 552 ntBASIC7.53□□□□□ -1.2
TRIM41Q8WV44 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM41Q8WV44 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM41Q8WV44 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 Y_RNA.76-201ENST00000362931 109 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 SNORD113-8-201ENST00000363497 74 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 Y_RNA.581-201ENST00000391017 97 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 AL353621.1-201ENST00000418219 243 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 TMEM167AP1-201ENST00000423409 219 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 AL078605.1-201ENST00000603529 500 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 AP001485.1-201ENST00000604799 199 ntBASIC7.52□□□□□ -1.21
TRIM41Q8WV44 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM41Q8WV44 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 DPPA2P2-201ENST00000418220 897 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC087650.1-201ENST00000431445 468 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC090774.1-201ENST00000435925 246 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 USP9YP7-201ENST00000436723 430 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 RPS26P2-201ENST00000440331 348 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 USP9YP32-201ENST00000452432 430 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC108751.2-201ENST00000469993 231 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 RPL30P10-201ENST00000488148 337 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 SNORA31.3-201ENST00000516029 96 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC026403.1-201ENST00000518938 295 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 MIR4472-2-201ENST00000582069 67 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC091178.1-203ENST00000584586 279 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC004852.3-201ENST00000614131 326 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AC005005.4-201ENST00000623789 16698 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 AL161912.2-201ENST00000565707 3007 ntBASIC7.51□□□□□ -1.21
TRIM41Q8WV44 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM41Q8WV44 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TRIM41Q8WV44 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM41Q8WV44 Y_RNA.8-201ENST00000362353 102 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 RNU6-1020P-201ENST00000363684 107 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 RNA5SP130-201ENST00000364431 114 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 RPL21P75-201ENST00000396599 483 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM41Q8WV44 MIR921-201ENST00000401133 56 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 RPL21P28-201ENST00000401418 483 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 AL590556.1-201ENST00000423231 483 ntBASIC7.5□□□□□ -1.21
TRIM41Q8WV44 PPP1R11P2-201ENST00000423543 382 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms