Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RSU1P2-202ENST00000437884 485 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL360221.1-201ENST00000445989 335 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RPL21P93-201ENST00000480465 489 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC233702.1-201ENST00000482905 502 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC093591.1-201ENST00000491435 481 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC087373.1-201ENST00000524920 491 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 COX6CP3-201ENST00000580869 223 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MIR4999-201ENST00000585029 91 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 BNIP3P23-201ENST00000599655 511 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC106028.5-201ENST00000610332 395 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC073968.1-201ENST00000618594 637 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MIR6130-201ENST00000619419 109 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MTND2P41-201ENST00000637599 773 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC092447.10-201ENST00000620607 1652 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1155P-201ENST00000363554 107 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1181P-201ENST00000384191 106 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MT-TC-201ENST00000387405 66 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 VPS26BP1-201ENST00000417155 755 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 snoU13.8-201ENST00000458890 104 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC080013.2-201ENST00000460866 323 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RBM43P1-201ENST00000476891 1081 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC022483.1-201ENST00000514020 567 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1073P-201ENST00000517182 106 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC013828.2-201ENST00000532487 235 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 PSMA3P-201ENST00000555485 635 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC090616.2-202ENST00000584248 222 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL355472.4-201ENST00000610233 626 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC122133.1-201ENST00000613964 233 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC010678.1-201ENST00000614118 713 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL355810.1-201ENST00000614629 552 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AP002791.1-201ENST00000623291 381 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC091931.1-201ENST00000623488 728 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC079416.3-201ENST00000624479 549 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC017037.3-201ENST00000625016 472 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AC097655.1-201ENST00000635075 318 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 CCT4P2-201ENST00000233836 1548 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 ELL2P3-201ENST00000457883 1602 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 Y_RNA.97-201ENST00000363094 102 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1-201ENST00000383898 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-36P-201ENST00000384172 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-4P-201ENST00000384205 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-5P-201ENST00000384238 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-3P-201ENST00000384314 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-2-201ENST00000384627 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-9-201ENST00000384776 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-33P-201ENST00000384793 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RPL21P24-201ENST00000413752 448 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 OR4K11P-201ENST00000431829 904 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RPL35AP22-201ENST00000436855 335 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RABEPKP1-201ENST00000440529 1026 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RAC1P7-201ENST00000445367 377 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC007395.1-201ENST00000451333 677 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 HMGB1P28-201ENST00000507778 552 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC116347.2-201ENST00000514912 523 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms