Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 MEMO1P3-201ENST00000459811 302 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 RPL21P47-201ENST00000483696 477 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 CENPUP1-201ENST00000526649 1202 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC024224.1-201ENST00000538284 609 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AL121821.2-201ENST00000556081 394 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC023813.2-201ENST00000564321 469 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 CYP2C61P-201ENST00000604072 290 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AL020996.3-201ENST00000606617 222 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC096577.2-201ENST00000611455 153 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC012676.2-201ENST00000619258 186 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC006386.2-201ENST00000624491 75 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC012005.1-201ENST00000624575 75 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 ZNF72P-201ENST00000425869 1908 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC092125.1-201ENST00000562568 1995 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 RNU1-124P-201ENST00000363861 145 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 RNU6-611P-201ENST00000384276 104 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 MIR670-201ENST00000390142 98 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 RAC1P8-201ENST00000427086 527 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL451062.2-201ENST00000427515 271 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL135790.2-201ENST00000437701 267 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 SSXP1-201ENST00000453640 473 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC048346.1-201ENST00000510247 144 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 SNORD116-28-201ENST00000516123 91 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 RNU6-703P-201ENST00000516946 107 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 RNA5SP135-201ENST00000517019 125 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 MTCO2P15-201ENST00000532655 656 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC090115.3-201ENST00000553218 849 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC068338.1-201ENST00000565567 176 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC093519.1-201ENST00000566109 298 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC002400.1-201ENST00000569310 726 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC002545.1-201ENST00000592511 181 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC013244.2-201ENST00000603396 103 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL035411.2-201ENST00000604022 421 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL355472.4-201ENST00000610233 626 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC091834.1-201ENST00000614543 472 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AL078604.3-201ENST00000615580 211 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 AC017037.3-201ENST00000625016 472 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 DBF4P1-201ENST00000412976 1892 ntBASIC0.63□□□□□ -2.31
SPTSSBQ8NFR3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 RNU6-582P-201ENST00000362989 107 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 RNU4-91P-201ENST00000364778 135 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 SNORD1A-201ENST00000364968 72 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 MIR1302-8-201ENST00000408342 128 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC013410.2-201ENST00000422627 201 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AL590233.1-201ENST00000430017 456 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 MTND1P28-201ENST00000435623 950 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 PRPS1P1-201ENST00000445305 876 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 RAD1P2-201ENST00000446414 663 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 UBL5P1-201ENST00000507979 193 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 SNORA31.17-201ENST00000516953 127 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 RNU1-92P-201ENST00000517017 135 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 SNORA70.24-201ENST00000517233 118 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AP005660.1-201ENST00000522972 293 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 BNIP3P24-201ENST00000593398 557 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 WISP1-OT1-201ENST00000602893 642 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 AL355802.3-201ENST00000607571 545 ntBASIC0.62□□□□□ -2.31
SPTSSBQ8NFR3 SNORA27.3-201ENST00000364937 134 ntBASIC0.61□□□□□ -2.31
SPTSSBQ8NFR3 MIR513A1-201ENST00000385138 129 ntBASIC0.61□□□□□ -2.31
SPTSSBQ8NFR3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.61□□□□□ -2.31
SPTSSBQ8NFR3 OR6C66P-201ENST00000414917 930 ntBASIC0.61□□□□□ -2.31
SPTSSBQ8NFR3 AL139415.2-201ENST00000431968 163 ntBASIC0.61□□□□□ -2.31
SPTSSBQ8NFR3 MTCO1P57-201ENST00000432182 261 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms