Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC108145.1-201ENST00000503770 153 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC022080.3-201ENST00000544433 482 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AL365440.1-201ENST00000436135 2167 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 SNORD14B-201ENST00000364533 90 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RNU6-200P-201ENST00000364743 107 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RNU6-700P-201ENST00000391043 107 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 TMSB10P2-201ENST00000416049 131 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AL117339.3-201ENST00000418733 162 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RPEP3-201ENST00000425462 676 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AL132765.1-201ENST00000434165 553 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 FABP5P15-201ENST00000453566 214 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 HMGB1P35-201ENST00000503360 598 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 RN7SKP92-201ENST00000517266 244 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 IGLV3-26-201ENST00000520756 302 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 HMGB1P14-201ENST00000557424 591 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AMZ2P1-203ENST00000565833 850 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 FAM60BP-201ENST00000578364 658 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AC079587.1-201ENST00000603846 277 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AC008962.1-201ENST00000605729 304 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 MIR8076-201ENST00000611401 83 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP43Q8NFH3 LINC01109-201ENST00000603837 3081 ntBASIC4.09□□□□□ -1.75
NUP43Q8NFH3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUP43Q8NFH3 AL592182.3-201ENST00000642132 3304 ntBASIC4.09□□□□□ -1.76
NUP43Q8NFH3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.76
NUP43Q8NFH3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUP43Q8NFH3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUP43Q8NFH3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.20-201ENST00000362479 113 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RNU6-212P-201ENST00000362642 104 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 SNORD50.1-201ENST00000362987 71 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RNA5SP146-201ENST00000410743 123 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RPS12P23-201ENST00000419579 400 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 NDUFB1P2-201ENST00000449477 176 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 U8.21-201ENST00000459536 136 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RPS26P28-201ENST00000470806 348 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RPL23AP45-201ENST00000476406 468 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC098869.1-201ENST00000481627 292 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 RPL30P10-201ENST00000488148 337 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 GZMAP1-201ENST00000503054 631 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 SNORD84-203ENST00000584275 78 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AL020997.2-201ENST00000602607 184 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC009318.2-201ENST00000610917 651 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC004852.3-201ENST00000614131 326 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC083809.1-201ENST00000615051 472 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AP001282.2-201ENST00000616149 309 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.08□□□□□ -1.76
NUP43Q8NFH3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
NUP43Q8NFH3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms