Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL137790.1-201ENST00000634283 177 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 Y_RNA.529-201ENST00000384586 119 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL445529.1-201ENST00000398713 389 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL138885.1-201ENST00000405921 675 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 RNU6-1148P-201ENST00000410992 104 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 USP9YP20-201ENST00000419224 558 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL353678.1-201ENST00000422735 741 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL590383.1-201ENST00000428602 75 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AF228730.2-201ENST00000438784 848 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 RPS15AP27-201ENST00000449183 343 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AP001086.1-201ENST00000494882 321 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC025554.1-201ENST00000505641 188 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 TTC39CP1-201ENST00000512513 755 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AP000763.2-201ENST00000540641 163 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC004024.1-201ENST00000549244 247 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC006270.2-201ENST00000578523 652 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 MIR4742-201ENST00000581069 85 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC092747.3-201ENST00000603769 301 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AL022345.1-201ENST00000607292 135 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 U2.17-201ENST00000611454 95 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC112487.2-201ENST00000637950 304 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 AC121333.1-201ENST00000567488 2709 ntBASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMC1BQ8NDV3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 SNORA31-201ENST00000362607 130 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU4-73P-201ENST00000363164 141 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 U3.12-201ENST00000364498 214 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU6-1013P-201ENST00000384180 107 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU6-393P-201ENST00000384475 107 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 SNORA44-201ENST00000384584 132 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 SNORD70.1-201ENST00000391007 85 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AL139039.1-201ENST00000401900 692 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 POLHP1-201ENST00000411806 470 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC007390.1-201ENST00000415722 356 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 BTF3L4P3-201ENST00000418879 476 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 DBIP2-201ENST00000419076 262 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 HSPE1P1-201ENST00000421494 318 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 VDAC1P3-201ENST00000434069 851 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 MRPL50P4-201ENST00000446432 475 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 Z75741.1-201ENST00000446793 314 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU6-329P-201ENST00000459618 107 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC110794.1-201ENST00000505816 425 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 FGF7P4-201ENST00000509595 295 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU6-189P-201ENST00000516120 101 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 Y_RNA.675-201ENST00000516389 149 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RNU6-143P-201ENST00000516942 93 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AP004242.1-201ENST00000533701 349 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 OR11H5P-201ENST00000554039 926 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC007687.1-201ENST00000602704 304 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 RMST_7.1-201ENST00000621935 268 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 C2orf27A-204ENST00000623058 969 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 TPTEP1-208ENST00000636884 213 ntBASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMC1BQ8NDV3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 USP8P1-201ENST00000494673 3183 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 UBE2L2-201ENST00000254302 429 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 MIR423-201ENST00000362201 94 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 Y_RNA.414-201ENST00000384011 101 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms