Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RN7SKP234-201ENST00000517173 224 ntBASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 AC104695.3-201ENST00000604052 296 ntBASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 MIR7851-201ENST00000610611 160 ntBASIC4.59□□□□□ -1.67
LINC00116Q8NCU8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
LINC00116Q8NCU8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LINC00116Q8NCU8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
LINC00116Q8NCU8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
LINC00116Q8NCU8 AC005592.1-201ENST00000566527 1640 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 RNA5SP374-201ENST00000362939 125 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 Y_RNA.153-201ENST00000363615 91 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC080125.1-201ENST00000414888 684 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 USMG5P1-201ENST00000425964 177 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 HMGB3P30-201ENST00000457863 606 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 RN7SL504P-201ENST00000494496 287 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC110794.1-201ENST00000505816 425 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 RNA5SP384-201ENST00000516615 116 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 MYL12BP1-201ENST00000569826 507 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC113195.1-201ENST00000579952 141 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AC067852.3-201ENST00000589177 561 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 PRR13P7-201ENST00000605538 430 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
LINC00116Q8NCU8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 RNU6-288P-201ENST00000363690 104 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 Y_RNA.645-201ENST00000391229 102 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 RNU6-293P-201ENST00000411259 106 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC017079.2-201ENST00000416102 485 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 SSXP9-201ENST00000417503 292 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 HMGB1P12-201ENST00000438594 598 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 CECR9-201ENST00000453421 199 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 SNORD5.1-201ENST00000458800 75 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 U8.20-201ENST00000459445 131 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC092451.1-201ENST00000480211 153 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 RNU6-1095P-201ENST00000516148 108 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 RNU6-264P-201ENST00000517134 104 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 GNAI2P1-201ENST00000541815 315 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 EIF4BP1-201ENST00000554881 351 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC011494.1-201ENST00000596454 237 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC012119.1-201ENST00000603184 222 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AC092447.9-201ENST00000603395 144 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 NUTF2P8-201ENST00000604593 363 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 AL161423.1-201ENST00000613700 262 ntBASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.57□□□□□ -1.68
LINC00116Q8NCU8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RNU6-99P-201ENST00000364721 107 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 SNORA63.7-201ENST00000365579 123 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RNU6-784P-201ENST00000384330 106 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RNU6-45P-201ENST00000384471 107 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AC009310.1-201ENST00000414414 451 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AC011742.1-201ENST00000431448 434 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AP000926.1-201ENST00000479573 241 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RN7SL283P-201ENST00000489055 303 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RNU6-307P-201ENST00000516743 106 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 OR4H12P-201ENST00000556269 907 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AC018889.1-201ENST00000605372 397 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 AC012603.1-201ENST00000606424 528 ntBASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
LINC00116Q8NCU8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms