Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RNU6-809P-201ENST00000384461 107 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RNU6-14P-201ENST00000384630 106 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 RPS27AP14-201ENST00000422868 454 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 RPL37P21-201ENST00000435890 276 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC092001.1-201ENST00000453012 261 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 SNORD11.1-201ENST00000459482 85 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RPL37P25-201ENST00000507308 276 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RNU6-581P-201ENST00000516214 105 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 RNU6-1003P-201ENST00000517099 105 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 MTCYBP22-201ENST00000603788 447 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AP000860.1-201ENST00000605250 559 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC107952.2-201ENST00000606048 486 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC108747.1-201ENST00000609508 535 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 uc_338.12-201ENST00000616344 181 ntBASIC2.56□□□□□ -2
HDDC3Q8N4P3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDDC3Q8N4P3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.56□□□□□ -2
HDDC3Q8N4P3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HDDC3Q8N4P3 RNU6-486P-201ENST00000363116 107 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 RNU2-36P-201ENST00000410361 191 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 RPS12P24-201ENST00000412619 387 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 RPL30P4-201ENST00000429309 333 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDDC3Q8N4P3 HMGB1P18-201ENST00000438801 619 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 AP001324.2-201ENST00000461163 319 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDDC3Q8N4P3 MTND1P3-201ENST00000484956 952 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC092104.1-201ENST00000497346 1441 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC108210.2-201ENST00000503681 201 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 RNA5SP112-201ENST00000515937 99 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 ROCK1P1-201ENST00000573767 549 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 ISCA1P3-201ENST00000577104 373 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC144521.1-201ENST00000607148 956 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC006338.1-201ENST00000618453 749 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 AC025048.6-202ENST00000627667 438 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 Z99571.1-201ENST00000636677 394 ntBASIC2.55□□□□□ -2
HDDC3Q8N4P3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HDDC3Q8N4P3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL391994.1-201ENST00000254724 282 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 MIR301A-201ENST00000385261 86 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RNA5SP210-201ENST00000391034 120 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RPL23AP39-201ENST00000415533 405 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL096701.2-201ENST00000416920 238 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL353777.1-201ENST00000425552 326 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL139415.2-201ENST00000431968 163 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.54□□□□□ -2
HDDC3Q8N4P3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.54□□□□□ -2
HDDC3Q8N4P3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.54□□□□□ -2
HDDC3Q8N4P3 AC092436.1-201ENST00000506450 503 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RNU6-677P-201ENST00000516914 101 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 RNU6-201P-201ENST00000517100 61 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 MTND4LP18-201ENST00000526864 291 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.54□□□□□ -2
HDDC3Q8N4P3 AC011458.1-201ENST00000604034 617 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AC018714.1-201ENST00000605028 208 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AL391813.2-201ENST00000609113 322 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.54□□□□□ -2
HDDC3Q8N4P3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms