Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS8Q8N3P4 RNU6-1282P-201ENST00000516735 96 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AC087465.1-201ENST00000560574 245 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AC021646.1-201ENST00000605469 484 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AC055876.5-201ENST00000605667 259 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AC073968.1-201ENST00000618594 637 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AC091925.2-201ENST00000625059 256 ntBASIC1.09□□□□□ -2.23
VPS8Q8N3P4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.09□□□□□ -2.23
VPS8Q8N3P4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
VPS8Q8N3P4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
VPS8Q8N3P4 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 DEFB108F-201ENST00000344638 222 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 RNU6-31P-201ENST00000384388 108 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 SNORA40.19-201ENST00000390846 128 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 MIR1290-201ENST00000408735 78 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 DDX3P2-201ENST00000446138 111 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 HMGB1P35-201ENST00000503360 598 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AC112198.4-201ENST00000515450 351 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 MIR3921-201ENST00000577308 85 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 AL031274.2-201ENST00000599419 203 ntBASIC1.08□□□□□ -2.24
VPS8Q8N3P4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS8Q8N3P4 RNA5SP325-201ENST00000363756 130 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 SNORD26-201ENST00000384147 75 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 MTND2P29-201ENST00000438595 412 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AL096803.2-201ENST00000450032 677 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AC117454.1-201ENST00000491120 168 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 DEFB108D-201ENST00000527787 222 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AC004812.1-201ENST00000540773 146 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
VPS8Q8N3P4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS8Q8N3P4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 Y_RNA.393-201ENST00000383936 102 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 MIR508-201ENST00000384857 115 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 MIR30A-201ENST00000385092 71 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AC007395.1-201ENST00000451333 677 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AC114786.4-201ENST00000508771 728 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AC114797.1-201ENST00000514003 728 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 SNORA48.11-201ENST00000517015 89 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AC005730.3-201ENST00000583067 366 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AL590410.1-201ENST00000617925 333 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 MTND4LP10-201ENST00000435146 291 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 PTENP1-201ENST00000447117 1215 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 AL592447.1-201ENST00000447592 540 ntBASIC1.06□□□□□ -2.24
VPS8Q8N3P4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS8Q8N3P4 DDX43P2-201ENST00000604753 1354 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AP000776.1-201ENST00000530032 1663 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 RNU6-17P-201ENST00000384245 107 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 RNU6-18P-201ENST00000384527 107 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC004865.1-201ENST00000442276 1003 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS8Q8N3P4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS8Q8N3P4 HMGB1P36-201ENST00000487709 576 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC103833.1-201ENST00000517442 172 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 IMMP1LP2-201ENST00000552954 492 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AL138478.1-201ENST00000612252 832 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 AC104763.3-201ENST00000613765 618 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 MIR6866-201ENST00000638146 69 ntBASIC1.05□□□□□ -2.24
VPS8Q8N3P4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 RNU6-338P-201ENST00000383888 105 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 UBE2V1P9-201ENST00000414760 368 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 RPS27P23-201ENST00000487608 251 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AC067904.2-201ENST00000517322 1283 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS8Q8N3P4 MIR6835-201ENST00000621552 64 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 AP003485.1-201ENST00000625093 753 ntBASIC1.04□□□□□ -2.24
VPS8Q8N3P4 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
VPS8Q8N3P4 TAF9BP2-201ENST00000400856 499 ntBASIC1.03□□□□□ -2.24
VPS8Q8N3P4 RPS24P7-201ENST00000416921 246 ntBASIC1.03□□□□□ -2.24
VPS8Q8N3P4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS8Q8N3P4 AL445305.1-201ENST00000432577 575 ntBASIC1.03□□□□□ -2.24
VPS8Q8N3P4 AL512844.2-201ENST00000433990 593 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms