Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 IPO8P1-201ENST00000455509 3109 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 MTND5P7-201ENST00000413558 1798 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC007656.2-201ENST00000624902 4547 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 SNORA71.2-201ENST00000364941 134 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNU1-73P-201ENST00000383971 164 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 MIR659-201ENST00000384963 97 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 MIR765-201ENST00000390226 114 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RPL21P17-201ENST00000397467 475 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNU6-174P-201ENST00000410406 106 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNA5SP31-201ENST00000411144 127 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AL117339.3-201ENST00000418733 162 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AL500522.2-201ENST00000448562 343 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNA5SP310-201ENST00000459084 116 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC015911.1-201ENST00000495111 156 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNA5SP384-201ENST00000516615 116 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 RNU6-1183P-201ENST00000517054 60 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AP004607.1-201ENST00000524456 203 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 MIR3609-201ENST00000582661 80 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 BNIP3P16-201ENST00000589779 534 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC116312.1-201ENST00000606841 314 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC090510.2-201ENST00000617465 629 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 MIR6076-201ENST00000617521 113 ntBASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD2Q8IV50 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LYSMD2Q8IV50 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
LYSMD2Q8IV50 ZNF807-201ENST00000328088 1707 ntBASIC3.65□□□□□ -1.82
LYSMD2Q8IV50 MTND5P30-201ENST00000452896 1731 ntBASIC3.65□□□□□ -1.82
LYSMD2Q8IV50 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNA5SP305-201ENST00000362665 119 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNU6-1059P-201ENST00000363752 98 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNU1-115P-201ENST00000365329 160 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNU6-842P-201ENST00000384269 107 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNU6-72P-201ENST00000384285 79 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNU6-308P-201ENST00000390957 107 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RPS4XP3-201ENST00000398541 413 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AL591034.2-201ENST00000402839 359 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RPL17P36-201ENST00000420302 549 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC091685.2-201ENST00000454924 864 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RPL35AP15-201ENST00000468042 339 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RN7SL174P-201ENST00000475578 289 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC008953.1-201ENST00000497334 318 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 Y_RNA.687-201ENST00000516558 91 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 RNA5SP309-201ENST00000516670 106 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 MIR8076-201ENST00000611401 83 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 MIR6861-201ENST00000618657 64 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 U2.21-201ENST00000637295 81 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 U4.7-201ENST00000638126 106 ntBASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD2Q8IV50 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 AL353746.1-201ENST00000566293 6881 ntBASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 RNU6-778P-201ENST00000363269 103 ntBASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 RNU6-884P-201ENST00000363889 107 ntBASIC3.64□□□□□ -1.83
LYSMD2Q8IV50 RNU6-1317P-201ENST00000364582 104 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms