Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC108747.1-201ENST00000609508 535 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AL161629.2-201ENST00000615347 275 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 Z69908.1-201ENST00000622603 247 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 ZNF355P-201ENST00000427301 3216 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 FAM35CP-201ENST00000554755 2470 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNU1-17P-201ENST00000363022 152 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNA5SP139-201ENST00000364340 117 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNU1-39P-201ENST00000383897 165 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNU6-432P-201ENST00000384196 109 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNA5SP213-201ENST00000391031 106 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RNU6-754P-201ENST00000391166 107 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RPL17P12-201ENST00000413391 526 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RPL7P54-201ENST00000438336 674 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 RPS15AP36-201ENST00000492022 382 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC091965.2-201ENST00000512324 613 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 HMGB1P14-201ENST00000557424 591 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC005951.2-201ENST00000576282 495 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC060766.3-201ENST00000591442 263 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC068790.3-201ENST00000602988 553 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AL358072.1-201ENST00000604156 575 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AP000787.2-201ENST00000604432 568 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC004908.3-201ENST00000610248 625 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
NPHP3Q7Z494 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NPHP3Q7Z494 DDX10P1-201ENST00000448545 1933 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AL138713.1-201ENST00000624026 2130 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 MIR6073-201ENST00000352083 89 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 SNORA23-201ENST00000365128 182 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 RNU6-14P-201ENST00000384630 106 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 MTND1P21-201ENST00000412991 285 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 UBE2FP1-201ENST00000416536 447 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 MTND1P28-201ENST00000435623 950 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 TAF9P1-201ENST00000445421 515 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 USP9YP12-201ENST00000450481 570 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 TAF9P2-201ENST00000454958 515 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 RN7SKP210-201ENST00000459176 261 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC132942.1-201ENST00000486753 483 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 OR5BM1P-201ENST00000512021 366 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 MTND5P13-201ENST00000513046 1079 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 RNU6-1053P-201ENST00000515930 101 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 HMGB1P41-201ENST00000520234 440 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 HMGN1P28-201ENST00000521340 364 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AL133153.1-201ENST00000557756 303 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AMZ2P1-203ENST00000565833 850 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AL356432.3-201ENST00000568952 465 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AL356575.1-201ENST00000603008 283 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC007038.2-201ENST00000608095 740 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC010378.1-201ENST00000619270 362 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 MIR6132-201ENST00000622083 109 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AC025048.6-202ENST00000627667 438 ntBASIC3.01□□□□□ -1.93
NPHP3Q7Z494 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.01□□□□□ -1.93
NPHP3Q7Z494 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NPHP3Q7Z494 RNY4P24-201ENST00000362735 96 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 RNU6-270P-201ENST00000364131 105 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 RNY3P10-201ENST00000384764 102 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 Z85995.1-201ENST00000415547 335 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3□□□□□ -1.93
NPHP3Q7Z494 ATG3P1-201ENST00000419507 911 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 CYCSP49-201ENST00000420810 319 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3□□□□□ -1.93
NPHP3Q7Z494 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3□□□□□ -1.93
NPHP3Q7Z494 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3□□□□□ -1.93
NPHP3Q7Z494 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3□□□□□ -1.93
NPHP3Q7Z494 LARP1BP2-201ENST00000486594 519 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 RPS27P27-201ENST00000498779 255 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC112204.1-201ENST00000502591 103 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3□□□□□ -1.93
NPHP3Q7Z494 FABP5P5-201ENST00000515537 406 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 RNU6-201P-201ENST00000517100 61 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC022616.6-201ENST00000520479 119 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AP003181.2-201ENST00000528941 181 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC068276.1-201ENST00000605793 379 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC097065.2-201ENST00000608159 533 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms