Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AP005435.4-201ENST00000529514 284 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC093788.1-201ENST00000609356 927 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC012409.4-201ENST00000612923 249 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AL162274.2-201ENST00000614406 332 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC007318.2-201ENST00000620999 243 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC025034.2-201ENST00000623264 286 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 MIR1321-201ENST00000637766 79 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC022336.2-201ENST00000568966 2538 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 ELF2P3-201ENST00000445099 1506 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RNU2-9P-201ENST00000410194 145 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 HSPE1P1-201ENST00000421494 318 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RPS3AP12-201ENST00000443616 753 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AL671855.1-201ENST00000446875 1203 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 FABP5P15-201ENST00000453566 214 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-953P-201ENST00000459154 107 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 CASP1P1-201ENST00000526345 212 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC107016.2-201ENST00000547968 190 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC025678.1-201ENST00000567861 338 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 MTATP6P3-201ENST00000581686 676 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC008521.1-201ENST00000587471 187 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 BNIP3P30-201ENST00000601184 574 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC025165.5-201ENST00000602802 578 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC098826.3-201ENST00000603823 466 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AL161798.1-201ENST00000604630 131 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC107294.1-201ENST00000609524 467 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC068944.2-201ENST00000610373 403 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC011155.2-201ENST00000623202 216 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 AC006020.1-201ENST00000420179 1854 ntBASIC3.5□□□□□ -1.85
SYNE3Q6ZMZ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC008264.2-201ENST00000610193 3731 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL049641.1-201ENST00000441055 1948 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC073325.2-201ENST00000339545 159 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 SNORD115-7-201ENST00000365306 82 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-190P-201ENST00000384154 102 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 SNORA9-201ENST00000384215 133 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 SNORA54-201ENST00000384281 123 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL031121.1-201ENST00000406553 254 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL590002.1-201ENST00000406554 418 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 MRPL50P2-201ENST00000416821 482 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL606489.2-201ENST00000433886 234 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 MTATP6P13-201ENST00000438531 667 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RNU7-63P-201ENST00000459054 62 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RPS23P3-201ENST00000470993 430 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC117440.1-201ENST00000474107 571 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RPL39P36-201ENST00000490784 156 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL160314.1-201ENST00000490836 438 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC117522.3-201ENST00000507974 584 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RN7SKP219-201ENST00000516825 296 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 RNA5SP471-201ENST00000516971 106 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AP001804.3-201ENST00000525146 880 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL512360.1-201ENST00000555346 234 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 MIR4506-201ENST00000584693 77 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC008752.3-201ENST00000588113 712 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AC078899.3-201ENST00000599065 212 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 AL161756.2-201ENST00000604597 246 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms