Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 RPL21P104-201ENST00000464143 478 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 CYCSP29-201ENST00000533731 318 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 AC007458.1-201ENST00000542812 373 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 SYF2P1-201ENST00000550658 413 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 NF1P5-201ENST00000588287 448 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 Z83818.1-201ENST00000603584 150 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 AC073657.2-201ENST00000605661 303 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 MIR6891-201ENST00000618788 93 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF43Q68DV7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AL592182.3-201ENST00000642132 3304 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC007529.1-201ENST00000418574 2178 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 RNU6-804P-201ENST00000384286 107 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 Y_RNA.581-201ENST00000391017 97 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 Y_RNA.602-201ENST00000410535 92 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 RNA5SP494-201ENST00000410653 129 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 RNA5SP104-201ENST00000410989 118 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC017079.2-201ENST00000416102 485 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AL360271.2-201ENST00000447710 161 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AL591623.2-201ENST00000449978 222 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AL078605.1-201ENST00000603529 500 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AL034351.1-201ENST00000605288 668 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 MIR15A-201ENST00000607334 83 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AP001005.3-201ENST00000622049 129 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 U6.92-201ENST00000636464 89 ntBASIC4.66□□□□□ -1.66
RNF43Q68DV7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF43Q68DV7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF43Q68DV7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
RNF43Q68DV7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF43Q68DV7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF43Q68DV7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RNF43Q68DV7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.66
RNF43Q68DV7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF43Q68DV7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF43Q68DV7 Y_RNA.8-201ENST00000362353 102 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 Y_RNA.304-201ENST00000365011 112 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 MIR578-201ENST00000384828 96 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AC099677.1-201ENST00000420575 175 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 AC092573.2-201ENST00000434546 243 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AL353748.1-201ENST00000440753 474 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 snoU13.22-201ENST00000459428 104 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AC133134.1-201ENST00000466800 359 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 SEPT14P8-201ENST00000508026 178 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 Y_RNA.662-201ENST00000516028 97 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 MIR5696-201ENST00000578474 85 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 AL139395.1-201ENST00000603662 160 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AC072026.1-201ENST00000605023 201 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 AC006329.2-201ENST00000611491 394 ntBASIC4.65□□□□□ -1.67
RNF43Q68DV7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF43Q68DV7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF43Q68DV7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF43Q68DV7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF43Q68DV7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF43Q68DV7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF43Q68DV7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF43Q68DV7 AC006971.1-201ENST00000407916 4486 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 RNU6-1020P-201ENST00000363684 107 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 RNA5SP151-201ENST00000365632 117 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 RNA5SP171-201ENST00000391071 115 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 CYCSP33-201ENST00000414485 327 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF43Q68DV7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF43Q68DV7 RPL23AP93-201ENST00000440847 484 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 PHBP16-201ENST00000446318 950 ntBASIC4.64□□□□□ -1.67
RNF43Q68DV7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms