Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC090971.4-201ENST00000560291 1800 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 OR4G2P-202ENST00000641004 1759 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 RNU6-1159P-201ENST00000362933 107 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 RNU6-378P-201ENST00000384324 107 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 RNU1-44P-201ENST00000384453 163 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.506-201ENST00000384494 102 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AL117339.3-201ENST00000418733 162 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AC006466.1-201ENST00000438721 289 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AC012671.1-201ENST00000451912 203 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 U8.22-201ENST00000459141 133 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 RN7SKP210-201ENST00000459176 261 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AF186190.1-201ENST00000517470 480 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AC087441.2-201ENST00000529141 262 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.38□□□□□ -1.55
RNF20Q5VTR2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF20Q5VTR2 HAUS6P2-201ENST00000433254 2404 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 MIR412-201ENST00000362142 91 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 SNORA58B-201ENST00000364259 136 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AL079342.1-201ENST00000401460 267 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 MTCYBP2-201ENST00000407745 171 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 RPS23P5-201ENST00000495419 428 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 RNA5SP497-201ENST00000516081 97 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 SNORA25.14-201ENST00000516481 132 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC084851.1-201ENST00000529105 249 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC024405.2-202ENST00000532731 184 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AP002392.1-201ENST00000537692 208 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC023824.2-201ENST00000566185 400 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC008121.1-201ENST00000603244 268 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.772-201ENST00000606692 102 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AL161629.2-201ENST00000615347 275 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 AC132825.6-201ENST00000638861 357 ntBASIC5.37□□□□□ -1.55
RNF20Q5VTR2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF20Q5VTR2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 RNU6-428P-201ENST00000362942 107 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 SNORD113-8-201ENST00000363497 74 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 RN7SKP103-201ENST00000363848 320 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 SNORD113.2-201ENST00000364166 89 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 RNU6-356P-201ENST00000384140 107 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 SNORA70F-201ENST00000384142 135 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 RNU6-937P-201ENST00000384325 106 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.581-201ENST00000391017 97 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 TOMM20P4-201ENST00000427861 435 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 AL445305.1-201ENST00000432577 575 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 AL049745.1-201ENST00000433953 286 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 PTMAP3-201ENST00000447474 330 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 NDUFB4P10-201ENST00000452541 359 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 CBX3P4-201ENST00000538909 354 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 AP002770.2-201ENST00000543613 532 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 SRGNP1-201ENST00000603392 451 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 LINC00901.1-201ENST00000617252 152 ntBASIC5.36□□□□□ -1.55
RNF20Q5VTR2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RNF20Q5VTR2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms