Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPL32P23-201ENST00000397237 405 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RPL21P65-201ENST00000406094 466 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 BPY2DP-201ENST00000422208 265 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 TOMM20P4-201ENST00000427861 435 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 NDUFA5P4-201ENST00000436704 385 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC098614.3-201ENST00000438957 440 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 PMCHL2-203ENST00000457791 237 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC084198.1-201ENST00000477747 402 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 SNORA19.2-201ENST00000516013 114 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 SNORA25.17-201ENST00000517184 124 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC090136.1-201ENST00000520009 240 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 HMGN2P15-201ENST00000585707 270 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL591034.3-201ENST00000605511 685 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 AL008636.1-201ENST00000625038 1018 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 SNORD113-7-201ENST00000363762 77 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RNU6-767P-201ENST00000384132 107 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RPL35AP12-201ENST00000425362 338 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RPL7P12-201ENST00000446719 750 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 RNU6-1069P-201ENST00000516612 133 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 BTF3P12-201ENST00000519620 469 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC005730.3-201ENST00000583067 366 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC087045.1-201ENST00000605856 382 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC112484.5-201ENST00000624189 228 ntBASIC3.55□□□□□ -1.84
RNF220Q5VTB9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF220Q5VTB9 AC110491.1-201ENST00000562191 2010 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 CBX3P1-201ENST00000325243 554 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC126755.2-208ENST00000327792 462 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC138969.1-213ENST00000331436 462 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNA5SP97-201ENST00000365006 84 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 Z98749.2-208ENST00000381646 500 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AL445189.1-201ENST00000405722 338 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNA5SP317-201ENST00000410176 116 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNA5SP311-201ENST00000411290 116 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 PGBD4P6-201ENST00000421501 610 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AP000907.1-201ENST00000428428 510 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC098831.1-201ENST00000440661 216 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC125238.1-201ENST00000448842 249 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 BTF3P15-201ENST00000455606 336 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RPS23P7-201ENST00000466210 444 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC046134.1-201ENST00000514454 666 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 SNORA31.21-201ENST00000517180 77 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RN7SKP256-201ENST00000517201 314 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 MIR6748-201ENST00000610433 71 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AL121757.2-201ENST00000611223 313 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 AC009248.2-201ENST00000619826 254 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 MIR6830-201ENST00000636015 70 ntBASIC3.54□□□□□ -1.84
RNF220Q5VTB9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RNF220Q5VTB9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms