Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM3Q53GG5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM3Q53GG5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM3Q53GG5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.8□□□□□ -1.96
PDLIM3Q53GG5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PDLIM3Q53GG5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MTND4P5-201ENST00000435821 1374 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU6-61P-201ENST00000365528 109 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU6-116P-201ENST00000384042 109 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU6-140P-201ENST00000384566 108 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL590002.1-201ENST00000406554 418 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MIR548F1-201ENST00000408667 84 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU2-33P-201ENST00000410344 192 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RN7SKP220-201ENST00000410611 288 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MTCO3P30-201ENST00000426425 670 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 GPM6BP2-201ENST00000432046 144 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RPL7P54-201ENST00000438336 674 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MTND1P34-201ENST00000438556 671 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 GPM6BP1-201ENST00000446387 144 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC125238.1-201ENST00000448842 249 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC027673.1-201ENST00000456245 405 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 snoU13.28-201ENST00000459235 104 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MRPS17P3-201ENST00000465453 385 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RPS20P22-201ENST00000473700 357 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC104806.1-201ENST00000508720 308 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC009646.1-201ENST00000510455 318 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU6-718P-201ENST00000516166 105 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 SNORA64.4-201ENST00000516632 81 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RNU6-143P-201ENST00000516942 93 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC104027.1-201ENST00000521887 300 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 OR5G4P-201ENST00000525251 760 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 ADI1P3-201ENST00000549509 470 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 RPS3AP4-201ENST00000555161 764 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 BNIP3P9-201ENST00000603714 553 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL161798.1-201ENST00000604630 131 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC092954.2-201ENST00000609103 430 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL365204.3-201ENST00000612448 685 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL354950.2-201ENST00000617939 290 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 CR381653.2-201ENST00000624041 768 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MTND5P42-201ENST00000637720 498 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC093010.3-201ENST00000570269 15214 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AL049641.1-201ENST00000441055 1948 ntBASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PDLIM3Q53GG5 AC008669.1-201ENST00000565823 2178 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC010680.1-201ENST00000590024 3590 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RNU6-1287P-201ENST00000362914 107 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RNU6-198P-201ENST00000384258 104 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RNU6-1060P-201ENST00000384664 107 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 Y_RNA.576-201ENST00000384781 102 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 Y_RNA.599-201ENST00000410489 109 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 ZNF90P2-204ENST00000419323 1075 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC099548.1-201ENST00000421443 426 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RPL36AP53-201ENST00000432891 316 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 HMGB1P18-201ENST00000438801 619 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 Z82210.1-201ENST00000440037 231 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC008264.1-201ENST00000447612 367 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 PSPHP1-201ENST00000450062 261 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC022364.2-201ENST00000457963 554 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 UBL5P3-201ENST00000475112 231 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC008752.3-201ENST00000588113 712 ntBASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM3Q53GG5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms