Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU6-778P-201ENST00000363269 103 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-270P-201ENST00000364131 105 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 RNU5E-4P-201ENST00000364931 120 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 MIR34A-201ENST00000385130 110 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 MIR1251-201ENST00000408552 70 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 RN7SKP32-201ENST00000410167 303 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AL035423.1-201ENST00000420331 213 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC083904.1-201ENST00000487828 231 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC110768.1-201ENST00000509222 400 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC243972.3-201ENST00000539655 198 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AL022345.1-201ENST00000607292 135 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 AP001486.2-201ENST00000561652 5113 ntBASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 Y_RNA.166-201ENST00000363730 102 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 Y_RNA.167-201ENST00000363735 109 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 Y_RNA.414-201ENST00000384011 101 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 IFNA20P-201ENST00000436840 528 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC083863.1-201ENST00000438811 231 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 RPL26P9-201ENST00000457466 433 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC011005.2-201ENST00000487324 359 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 HMGN1P12-201ENST00000499125 195 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC008628.2-201ENST00000502605 298 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 HMGN1P11-201ENST00000508668 303 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC090136.1-201ENST00000520009 240 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 ATP1B3P1-201ENST00000605365 821 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 BRDTP1-201ENST00000605735 677 ntBASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144BQ3MJ40 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 RHEBP3-201ENST00000411920 351 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 RPS29P4-201ENST00000414733 161 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL353729.1-201ENST00000425044 720 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL583843.1-201ENST00000456070 346 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 snoU13.28-201ENST00000459235 104 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AC104619.4-201ENST00000510773 249 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 MIR5187-201ENST00000583479 76 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AL591424.2-201ENST00000617023 128 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AC244205.2-202ENST00000635781 342 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 AC233263.6-201ENST00000631132 1963 ntBASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC144BQ3MJ40 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 SNORA75B-201ENST00000384053 137 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 SNORA9-201ENST00000384215 133 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-166P-201ENST00000384371 107 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MIR183-201ENST00000384958 110 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MIR34B-201ENST00000385076 84 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-1009P-201ENST00000390996 107 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AL356057.2-201ENST00000403318 432 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RPL5P18-201ENST00000406671 891 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 RAP1BP3-201ENST00000407180 549 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MTND3P8-201ENST00000412909 339 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 MTND4LP16-201ENST00000440828 295 ntBASIC4.35□□□□□ -1.71
CCDC144BQ3MJ40 AC106707.2-201ENST00000484182 374 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms