Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 Y_RNA.269-201ENST00000364685 89 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SF3A2Q15428 RNU6-750P-201ENST00000390946 107 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AC119751.3-201ENST00000399720 670 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AL008987.1-201ENST00000415528 237 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 RPS24P7-201ENST00000416921 246 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 MTCO2P21-201ENST00000419780 677 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 CETN4P-201ENST00000432407 469 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 SNRPEP9-201ENST00000436794 238 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.2□□□□□ -2.06
SF3A2Q15428 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 MTCO2P6-201ENST00000463134 685 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 RPS27AP10-201ENST00000496103 208 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
SF3A2Q15428 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.2□□□□□ -2.06
SF3A2Q15428 MRPS36P3-201ENST00000519284 130 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3A2Q15428 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.2□□□□□ -2.06
SF3A2Q15428 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3A2Q15428 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3A2Q15428 AC025588.2-201ENST00000604851 466 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AC004805.2-201ENST00000605382 482 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AC239868.4-201ENST00000608318 671 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.2□□□□□ -2.06
SF3A2Q15428 HMGB1P24-202ENST00000615653 685 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AC021755.4-201ENST00000616620 456 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AL607023.1-201ENST00000620045 248 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.2□□□□□ -2.06
SF3A2Q15428 AC112204.3-201ENST00000623822 332 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 AL137003.2-201ENST00000606924 2538 ntBASIC2.2□□□□□ -2.06
SF3A2Q15428 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SF3A2Q15428 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SF3A2Q15428 CCNG1P1-201ENST00000406783 885 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 MIR320C1-201ENST00000408566 88 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
SF3A2Q15428 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.19□□□□□ -2.06
SF3A2Q15428 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.19□□□□□ -2.06
SF3A2Q15428 USP9YP13-201ENST00000417797 480 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 HMGB1P49-201ENST00000418882 569 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 BPY2DP-201ENST00000422208 265 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.19□□□□□ -2.06
SF3A2Q15428 SKA2P1-201ENST00000425592 390 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AL445669.1-201ENST00000426743 755 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.19□□□□□ -2.06
SF3A2Q15428 AC010631.1-201ENST00000474150 156 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.19□□□□□ -2.06
SF3A2Q15428 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.19□□□□□ -2.06
SF3A2Q15428 MTND5P13-201ENST00000513046 1079 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 RNU5F-8P-201ENST00000515941 111 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 SCARNA11.3-201ENST00000517276 130 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AP003467.2-201ENST00000520175 319 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.19□□□□□ -2.06
SF3A2Q15428 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.19□□□□□ -2.06
SF3A2Q15428 MTCO2P15-201ENST00000532655 656 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.19□□□□□ -2.06
SF3A2Q15428 DPPA3P3-201ENST00000603842 430 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AC135507.1-201ENST00000607214 561 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AC097478.2-201ENST00000610572 514 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 MIR6845-201ENST00000613182 61 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AP002782.1-201ENST00000623107 614 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 AC120349.3-201ENST00000624377 529 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 PCMTD1P7-201ENST00000634506 357 ntBASIC2.19□□□□□ -2.06
SF3A2Q15428 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SF3A2Q15428 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SF3A2Q15428 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SF3A2Q15428 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SF3A2Q15428 Y_RNA.245-201ENST00000364493 95 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 MTCO1P17-201ENST00000411522 491 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 RPL21P24-201ENST00000413752 448 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AC010099.3-201ENST00000423896 409 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 MED14P1-201ENST00000430517 648 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 MTND1P28-201ENST00000435623 950 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 RSU1P2-202ENST00000437884 485 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AC020550.1-201ENST00000447385 163 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 CECR9-201ENST00000453421 199 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC233279.1-201ENST00000455300 423 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AL121769.1-201ENST00000469473 401 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 NDUFB4P2-201ENST00000509515 391 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 SNORA31.18-201ENST00000517043 134 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 MTND2P38-201ENST00000522536 667 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.18□□□□□ -2.06
SF3A2Q15428 AL133153.1-201ENST00000557756 303 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 MYL12BP1-201ENST00000569826 507 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.18□□□□□ -2.06
SF3A2Q15428 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
SF3A2Q15428 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms