Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL589994.2-201ENST00000621124 579 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 FRG1KP-201ENST00000623592 341 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC025048.6-202ENST00000627667 438 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
GABPAQ06546 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
GABPAQ06546 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
GABPAQ06546 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.71□□□□□ -1.98
GABPAQ06546 RNU6-884P-201ENST00000363889 107 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 SNORD116-8-201ENST00000384365 95 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
GABPAQ06546 AL079342.1-201ENST00000401460 267 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.71□□□□□ -1.98
GABPAQ06546 ELOCP14-201ENST00000428070 331 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC093106.2-201ENST00000428212 385 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.71□□□□□ -1.98
GABPAQ06546 RPS15AP28-201ENST00000435088 386 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 ELOCP7-201ENST00000439968 331 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 MTND4P25-201ENST00000441039 533 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AL513124.1-201ENST00000450410 614 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 MTND1P3-201ENST00000484956 952 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 RPS27P27-201ENST00000498779 255 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
GABPAQ06546 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 RNA5SP471-201ENST00000516971 106 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC011979.2-201ENST00000527568 352 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AP003122.4-201ENST00000530980 758 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.71□□□□□ -1.98
GABPAQ06546 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.98
GABPAQ06546 RPL21P5-201ENST00000554662 472 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC009163.5-201ENST00000575421 637 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 MIR4648-201ENST00000580107 72 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.71□□□□□ -1.98
GABPAQ06546 AC009977.1-201ENST00000586015 570 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 Z99497.2-201ENST00000603634 310 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 AC098826.3-201ENST00000603823 466 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GABPAQ06546 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
GABPAQ06546 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
GABPAQ06546 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
GABPAQ06546 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
GABPAQ06546 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
GABPAQ06546 AC010680.1-201ENST00000590024 3590 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
GABPAQ06546 RNU4-21P-201ENST00000362802 126 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 RNA5SP139-201ENST00000364340 117 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 RNY3P9-201ENST00000384727 106 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
GABPAQ06546 SEPT2P1-201ENST00000419651 180 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.7□□□□□ -1.98
GABPAQ06546 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.7□□□□□ -1.98
GABPAQ06546 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.7□□□□□ -1.98
GABPAQ06546 SNRPEP9-201ENST00000436794 238 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 TAF9P1-201ENST00000445421 515 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.7□□□□□ -1.98
GABPAQ06546 RPS27AP8-201ENST00000452665 445 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 TAF9P2-201ENST00000454958 515 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 MTND1P12-201ENST00000455231 147 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 SNRPGP9-201ENST00000456025 225 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.7□□□□□ -1.98
GABPAQ06546 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.7□□□□□ -1.98
GABPAQ06546 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.7□□□□□ -1.98
GABPAQ06546 YWHAEP4-201ENST00000505390 198 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 RNA5SP337-201ENST00000517007 109 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AP003467.2-201ENST00000520175 319 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.7□□□□□ -1.98
GABPAQ06546 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.6-201ENST00000603753 252 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.11-201ENST00000604059 253 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL161798.1-201ENST00000604630 131 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AC008162.1-201ENST00000604718 254 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.1-201ENST00000604752 252 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.5-201ENST00000605253 252 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.12-201ENST00000605291 253 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.8-201ENST00000605353 252 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 AL670379.7-201ENST00000605823 252 ntBASIC2.7□□□□□ -1.98
GABPAQ06546 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GABPAQ06546 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
GABPAQ06546 U3.4-201ENST00000363352 213 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 RNU6-511P-201ENST00000363496 107 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 RNU6-288P-201ENST00000363690 104 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 RNY3P10-201ENST00000384764 102 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.69□□□□□ -1.98
GABPAQ06546 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.69□□□□□ -1.98
GABPAQ06546 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.69□□□□□ -1.98
GABPAQ06546 ZNF90P2-204ENST00000419323 1075 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC007283.2-201ENST00000424739 197 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.69□□□□□ -1.98
GABPAQ06546 AC092427.1-202ENST00000430569 476 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 GPM6BP2-201ENST00000432046 144 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 MTND1P28-201ENST00000435623 950 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.69□□□□□ -1.98
GABPAQ06546 USP9YP15-201ENST00000442391 422 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 AC010095.1-201ENST00000443543 144 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 Z96811.1-201ENST00000445880 108 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 GPM6BP1-201ENST00000446387 144 ntBASIC2.69□□□□□ -1.98
GABPAQ06546 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.69□□□□□ -1.98
GABPAQ06546 RNU7-23P-201ENST00000459465 62 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms