Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDC42EP1Q00587 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.84□□□□□ -1.79
CDC42EP1Q00587 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42EP1Q00587 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42EP1Q00587 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNU4-79P-201ENST00000362764 141 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.58-201ENST00000362807 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNU6-254P-201ENST00000363377 107 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.154-201ENST00000363624 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNA5SP387-201ENST00000364226 106 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.245-201ENST00000364493 95 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNY3P1-201ENST00000365085 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.333-201ENST00000365274 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNY3-201ENST00000365484 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.490-201ENST00000384413 102 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNVU1-14-201ENST00000384770 164 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 MIR490-201ENST00000384865 128 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 MIR493-201ENST00000385254 89 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 MIR301A-201ENST00000385261 86 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 DBIP2-201ENST00000419076 262 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 PIGFP3-201ENST00000441918 722 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RPS3AP12-201ENST00000443616 753 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AL121877.1-201ENST00000453704 622 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 MTND4P17-201ENST00000470444 350 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 KC877373.1-201ENST00000479066 408 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 MTCO1P29-201ENST00000496868 288 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 SNORA14.1-201ENST00000516113 141 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.682-201ENST00000516457 100 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RNU6-1315P-201ENST00000517187 99 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
CDC42EP1Q00587 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP1Q00587 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.67-201ENST00000362870 100 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RNU6-371P-201ENST00000364283 108 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 MIR578-201ENST00000384828 96 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RNU2-33P-201ENST00000410344 192 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RPS20P15-201ENST00000412792 311 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 GPM6BP2-201ENST00000432046 144 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RPS24P13-201ENST00000442520 397 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC009237.8-201ENST00000445492 379 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 GPM6BP1-201ENST00000446387 144 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC233279.1-201ENST00000455300 423 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RPL21P104-201ENST00000464143 478 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RPL7P43-201ENST00000478876 753 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RNU6-256P-201ENST00000516747 97 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AL360157.1-201ENST00000565962 87 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 MIR5195-201ENST00000583555 115 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC012468.1-201ENST00000604888 430 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 MTND1P37-201ENST00000636562 264 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 MAPK10-253ENST00000641010 4072 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 AC116096.1-201ENST00000566804 2314 ntBASIC3.82□□□□□ -1.8
CDC42EP1Q00587 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CDC42EP1Q00587 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP1Q00587 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CDC42EP1Q00587 RNU4-76P-201ENST00000364509 141 ntBASIC3.81□□□□□ -1.8
CDC42EP1Q00587 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.384-201ENST00000383909 102 ntBASIC3.81□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.460-201ENST00000384255 102 ntBASIC3.81□□□□□ -1.8
CDC42EP1Q00587 Y_RNA.474-201ENST00000384341 102 ntBASIC3.81□□□□□ -1.8
CDC42EP1Q00587 MIR450B-201ENST00000401182 78 ntBASIC3.81□□□□□ -1.8
CDC42EP1Q00587 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms