Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
RPS28P62857 RNU6-1274P-201ENST00000384557 107 ntBASIC0.79□□□□□ -2.28
RPS28P62857 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
RPS28P62857 SNORA11.4-201ENST00000408823 129 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC0.79□□□□□ -2.28
RPS28P62857 PIGPP2-201ENST00000411569 458 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.79□□□□□ -2.28
RPS28P62857 AL592148.1-201ENST00000413568 445 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC138623.1-201ENST00000418060 216 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.79□□□□□ -2.28
RPS28P62857 AL022400.1-201ENST00000423946 935 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC008267.5-201ENST00000424928 265 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AL451062.2-201ENST00000427515 271 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.79□□□□□ -2.28
RPS28P62857 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.79□□□□□ -2.28
RPS28P62857 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC0.79□□□□□ -2.28
RPS28P62857 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC0.79□□□□□ -2.28
RPS28P62857 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
RPS28P62857 FABP5P15-201ENST00000453566 214 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC0.79□□□□□ -2.28
RPS28P62857 AC087477.1-201ENST00000465747 340 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC023194.1-201ENST00000493084 308 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.79□□□□□ -2.28
RPS28P62857 AC097462.2-201ENST00000504623 481 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC0.79□□□□□ -2.28
RPS28P62857 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
RPS28P62857 HIGD1AP13-201ENST00000509878 289 ntBASIC0.79□□□□□ -2.28
RPS28P62857 RNU6-714P-201ENST00000516963 103 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.79□□□□□ -2.28
RPS28P62857 RAB11AP2-201ENST00000545905 639 ntBASIC0.79□□□□□ -2.28
RPS28P62857 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.79□□□□□ -2.28
RPS28P62857 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.79□□□□□ -2.28
RPS28P62857 AC007621.1-201ENST00000604544 437 ntBASIC0.79□□□□□ -2.28
RPS28P62857 Z82243.1-201ENST00000609432 473 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AL133445.2-201ENST00000611191 527 ntBASIC0.79□□□□□ -2.28
RPS28P62857 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
RPS28P62857 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC0.79□□□□□ -2.28
RPS28P62857 MIR6134-201ENST00000617606 109 ntBASIC0.79□□□□□ -2.28
RPS28P62857 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
RPS28P62857 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RPS28P62857 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPS28P62857 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RPS28P62857 HAUS6P2-201ENST00000433254 2404 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RPL32P3-201ENST00000359025 275 ntBASIC0.78□□□□□ -2.28
RPS28P62857 SNORD33-201ENST00000362761 85 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNU6-353P-201ENST00000364266 108 ntBASIC0.78□□□□□ -2.28
RPS28P62857 SNORD14B-201ENST00000364533 90 ntBASIC0.78□□□□□ -2.28
RPS28P62857 SNORD1A-201ENST00000364968 72 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNU6-432P-201ENST00000384196 109 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNU6-1300P-201ENST00000391046 108 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL356057.1-202ENST00000402263 756 ntBASIC0.78□□□□□ -2.28
RPS28P62857 BX119904.4-201ENST00000424402 301 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RPL35AP12-201ENST00000425362 338 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL645568.3-201ENST00000433683 316 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL591503.2-201ENST00000442314 1005 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNFT1P2-201ENST00000443064 757 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AC020550.1-201ENST00000447385 163 ntBASIC0.78□□□□□ -2.28
RPS28P62857 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC0.78□□□□□ -2.28
RPS28P62857 MTND1P9-201ENST00000453775 944 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.78□□□□□ -2.28
RPS28P62857 SNORD97-201ENST00000459187 142 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC0.78□□□□□ -2.28
RPS28P62857 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.78□□□□□ -2.28
RPS28P62857 RNU2-53P-201ENST00000516257 147 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNU5B-3P-201ENST00000516601 115 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AC022616.8-201ENST00000533569 253 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AC022080.3-201ENST00000544433 482 ntBASIC0.78□□□□□ -2.28
RPS28P62857 RBM7-208ENST00000545678 867 ntTSL 3 BASIC0.78□□□□□ -2.28
RPS28P62857 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.78□□□□□ -2.28
RPS28P62857 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC0.78□□□□□ -2.28
RPS28P62857 AC007224.1-201ENST00000564410 144 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AC068338.1-201ENST00000565567 176 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.78□□□□□ -2.28
RPS28P62857 SNRPGP19-201ENST00000603826 189 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.78□□□□□ -2.28
RPS28P62857 Y_RNA.783-201ENST00000613546 102 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL132822.1-201ENST00000617063 513 ntBASIC0.78□□□□□ -2.28
RPS28P62857 AL356266.1-201ENST00000623311 483 ntBASIC0.78□□□□□ -2.28
RPS28P62857 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
RPS28P62857 SNRPEP3-201ENST00000338402 276 ntBASIC0.77□□□□□ -2.29
RPS28P62857 RNU6-743P-201ENST00000364151 106 ntBASIC0.77□□□□□ -2.29
RPS28P62857 SNORA18.3-201ENST00000384122 132 ntBASIC0.77□□□□□ -2.29
RPS28P62857 RNU6-754P-201ENST00000391166 107 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AL360182.1-201ENST00000397433 468 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AC069282.1-201ENST00000411911 526 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.77□□□□□ -2.29
RPS28P62857 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.77□□□□□ -2.29
RPS28P62857 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC0.77□□□□□ -2.29
RPS28P62857 AC027119.1-201ENST00000440877 241 ntBASIC0.77□□□□□ -2.29
RPS28P62857 PGBD4P5-201ENST00000445958 426 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AL035666.1-201ENST00000446195 348 ntBASIC0.77□□□□□ -2.29
RPS28P62857 HSPE1P13-201ENST00000451143 297 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.77□□□□□ -2.29
RPS28P62857 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.77□□□□□ -2.29
RPS28P62857 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
RPS28P62857 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.77□□□□□ -2.29
RPS28P62857 CENPUP1-201ENST00000526649 1202 ntBASIC0.77□□□□□ -2.29
RPS28P62857 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.77□□□□□ -2.29
RPS28P62857 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms