Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC011494.1-201ENST00000596454 237 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC107075.1-201ENST00000613695 314 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.97□□□□□ -2.25
CKS1BP61024 MTCO1P9-201ENST00000505577 1534 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.97□□□□□ -2.25
CKS1BP61024 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.97□□□□□ -2.25
CKS1BP61024 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.96□□□□□ -2.26
CKS1BP61024 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
CKS1BP61024 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CKS1BP61024 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CKS1BP61024 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CKS1BP61024 SNORD115-3-201ENST00000363100 82 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 RNU5E-8P-201ENST00000363502 116 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 Y_RNA.500-201ENST00000384466 111 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 AL358453.1-201ENST00000422522 250 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 MTND2P5-201ENST00000432656 1006 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 CR769776.1-201ENST00000441254 787 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.96□□□□□ -2.26
CKS1BP61024 snoU13.9-201ENST00000458927 103 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.96□□□□□ -2.26
CKS1BP61024 AC093677.1-201ENST00000514414 678 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 RNU6-295P-201ENST00000516901 104 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.96□□□□□ -2.26
CKS1BP61024 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.96□□□□□ -2.26
CKS1BP61024 AC079598.5-201ENST00000547460 117 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.96□□□□□ -2.26
CKS1BP61024 BNIP3P24-201ENST00000593398 557 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 AL035411.2-201ENST00000604022 421 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.96□□□□□ -2.26
CKS1BP61024 VN1R9P-201ENST00000614184 867 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 AC004009.2-201ENST00000623016 728 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CKS1BP61024 MTND5P11-201ENST00000511037 1812 ntBASIC0.96□□□□□ -2.26
CKS1BP61024 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CKS1BP61024 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 RPL22P22-201ENST00000395439 379 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC002381.1-201ENST00000447049 280 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 UBL5P3-201ENST00000475112 231 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 AL121594.1-201ENST00000475906 575 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.95□□□□□ -2.26
CKS1BP61024 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC008837.1-201ENST00000511513 412 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.95□□□□□ -2.26
CKS1BP61024 SNORA25.11-201ENST00000515935 105 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.95□□□□□ -2.26
CKS1BP61024 CYCSP27-201ENST00000527643 293 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 OR5B19P-201ENST00000531766 928 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.95□□□□□ -2.26
CKS1BP61024 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.95□□□□□ -2.26
CKS1BP61024 MIR4255-201ENST00000579351 72 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 CYP2C61P-201ENST00000604072 290 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 AC004805.2-201ENST00000605382 482 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 MIR6845-201ENST00000613182 61 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 AC006338.1-201ENST00000618453 749 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 AC017037.3-201ENST00000625016 472 ntBASIC0.95□□□□□ -2.26
CKS1BP61024 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.95□□□□□ -2.26
CKS1BP61024 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CKS1BP61024 U8.1-201ENST00000362843 134 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 SNORA62.1-201ENST00000364287 154 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 RNU6-203P-201ENST00000384038 104 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 U8.13-201ENST00000390842 128 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.94□□□□□ -2.26
CKS1BP61024 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.94□□□□□ -2.26
CKS1BP61024 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.94□□□□□ -2.26
CKS1BP61024 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.94□□□□□ -2.26
CKS1BP61024 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AL691517.1-201ENST00000440833 1235 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.94□□□□□ -2.26
CKS1BP61024 AC093801.2-201ENST00000503966 1050 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.94□□□□□ -2.26
CKS1BP61024 AC025465.3-201ENST00000510570 311 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CKS1BP61024 RNU6-528P-201ENST00000516926 100 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 RNA5SP135-201ENST00000517019 125 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 RNA5SP290-201ENST00000517133 127 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 RNU6-667P-201ENST00000517186 102 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CKS1BP61024 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.94□□□□□ -2.26
CKS1BP61024 PSMA3P-201ENST00000555485 635 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AL121821.2-201ENST00000556081 394 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.94□□□□□ -2.26
CKS1BP61024 AC023824.3-201ENST00000569003 562 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.94□□□□□ -2.26
CKS1BP61024 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.94□□□□□ -2.26
CKS1BP61024 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.94□□□□□ -2.26
CKS1BP61024 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CKS1BP61024 AL121890.5-201ENST00000620848 304 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC079416.3-201ENST00000624479 549 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 AC091965.5-201ENST00000624785 342 ntBASIC0.94□□□□□ -2.26
CKS1BP61024 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms