Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC009902.1-201ENST00000519351 183 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 OR5AL2P-201ENST00000532185 920 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RHBDL3P58872 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.69□□□□□ -1.82
RHBDL3P58872 MIR4425-201ENST00000580572 84 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 MIR548AC-201ENST00000585049 88 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC008521.1-201ENST00000587471 187 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.69□□□□□ -1.82
RHBDL3P58872 AC078899.3-201ENST00000599065 212 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 Z84480.1-201ENST00000605131 311 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 U6.42-201ENST00000618440 107 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC093648.1-201ENST00000623546 606 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC091903.1-201ENST00000624322 454 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.69□□□□□ -1.82
RHBDL3P58872 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 AL035425.3-201ENST00000564206 4996 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC010889.1-201ENST00000566193 2666 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
RHBDL3P58872 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDL3P58872 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RHBDL3P58872 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDL3P58872 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDL3P58872 AC073325.2-201ENST00000339545 159 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RHBDL3P58872 MIR412-201ENST00000362142 91 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 SNORA71.1-201ENST00000364523 117 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 Y_RNA.359-201ENST00000365498 102 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 RNU4-48P-201ENST00000365559 182 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDL3P58872 AL356057.2-201ENST00000403318 432 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 SDCBPP3-201ENST00000419629 891 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 MTCYBP5-201ENST00000423752 1135 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 AL139132.1-201ENST00000431587 344 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 OR2B8P-201ENST00000432841 938 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDL3P58872 MTCYBP1-201ENST00000454315 1119 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDL3P58872 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDL3P58872 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDL3P58872 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 RNU6-685P-201ENST00000517088 95 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 SUB1P2-201ENST00000556401 297 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 LINC00933-203ENST00000559812 219 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDL3P58872 AC010546.1-201ENST00000569391 485 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 AL138889.2-201ENST00000603883 242 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDL3P58872 AC004944.1-201ENST00000517807 3059 ntBASIC3.68□□□□□ -1.82
RHBDL3P58872 Y_RNA.296-201ENST00000364930 108 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 RNU6-282P-201ENST00000365357 103 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RHBDL3P58872 SNORA40C-201ENST00000391285 128 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AL512633.1-201ENST00000399931 655 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 DEFB108C-201ENST00000400154 252 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 RNA5SP31-201ENST00000411144 127 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC073464.1-201ENST00000429823 534 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AL358934.1-201ENST00000432346 324 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AL441985.1-201ENST00000457727 251 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC104806.1-201ENST00000508720 308 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 MTND3P5-201ENST00000512798 333 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 RNA5SP503-201ENST00000517047 117 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC090136.1-201ENST00000520009 240 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.67□□□□□ -1.82
RHBDL3P58872 TRAV37-201ENST00000553906 342 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 MIR5692A1-201ENST00000580523 69 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AL645944.1-201ENST00000603857 493 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC019159.1-201ENST00000605094 187 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AL670379.4-201ENST00000605279 254 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC098614.4-201ENST00000607601 462 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RHBDL3P58872 AC136475.10-201ENST00000620253 385 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 MIR6852-201ENST00000621699 66 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 AC073476.4-201ENST00000628409 72 ntBASIC3.67□□□□□ -1.82
RHBDL3P58872 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDL3P58872 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDL3P58872 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDL3P58872 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RHBDL3P58872 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDL3P58872 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDL3P58872 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RHBDL3P58872 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDL3P58872 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RHBDL3P58872 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDL3P58872 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDL3P58872 MIR22-201ENST00000362190 85 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 RNU6-1120P-201ENST00000362988 108 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 RNU6-606P-201ENST00000384721 111 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RHBDL3P58872 GSTA9P-201ENST00000406231 611 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 BTF3L4P1-201ENST00000413813 468 ntBASIC3.66□□□□□ -1.82
RHBDL3P58872 AL513477.1-202ENST00000417061 214 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms