Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC005005.2-201ENST00000420779 380 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
VSX2P58304 FABP5P15-201ENST00000453566 214 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.02□□□□□ -2.09
VSX2P58304 AC013267.1-201ENST00000458227 267 ntBASIC2.02□□□□□ -2.09
VSX2P58304 TRBV1-201ENST00000476502 284 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC104685.1-201ENST00000502445 371 ntBASIC2.02□□□□□ -2.09
VSX2P58304 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
VSX2P58304 SNORA31.3-201ENST00000516029 96 ntBASIC2.02□□□□□ -2.09
VSX2P58304 RNA5SP216-201ENST00000516111 123 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.02□□□□□ -2.09
VSX2P58304 BTF3P12-201ENST00000519620 469 ntBASIC2.02□□□□□ -2.09
VSX2P58304 EEF1A1P37-201ENST00000522748 715 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AP006587.4-201ENST00000526053 529 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.02□□□□□ -2.09
VSX2P58304 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
VSX2P58304 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VSX2P58304 RPS3AP23-202ENST00000574601 686 ntBASIC2.02□□□□□ -2.09
VSX2P58304 BNIP3P40-201ENST00000596017 556 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC068790.3-201ENST00000602988 553 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC107952.2-201ENST00000606048 486 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC021755.4-201ENST00000616620 456 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC007490.1-201ENST00000624321 703 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AC079416.3-201ENST00000624479 549 ntBASIC2.02□□□□□ -2.09
VSX2P58304 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.02□□□□□ -2.09
VSX2P58304 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
VSX2P58304 AC006927.4-201ENST00000639187 543 ntBASIC2.02□□□□□ -2.09
VSX2P58304 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.02□□□□□ -2.09
VSX2P58304 MTND5P29-201ENST00000458676 1807 ntBASIC2.02□□□□□ -2.09
VSX2P58304 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VSX2P58304 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VSX2P58304 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VSX2P58304 AC110491.1-201ENST00000562191 2010 ntBASIC2.01□□□□□ -2.09
VSX2P58304 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 AC004520.1-201ENST00000608362 1413 ntBASIC2.01□□□□□ -2.09
VSX2P58304 RNA5SP432-201ENST00000362480 116 ntBASIC2.01□□□□□ -2.09
VSX2P58304 RNU6-701P-201ENST00000384059 107 ntBASIC2.01□□□□□ -2.09
VSX2P58304 RNU6-1200P-201ENST00000384162 107 ntBASIC2.01□□□□□ -2.09
VSX2P58304 RNU6-220P-201ENST00000390919 107 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.01□□□□□ -2.09
VSX2P58304 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
VSX2P58304 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.01□□□□□ -2.09
VSX2P58304 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 ISCA1P1-201ENST00000426679 387 ntBASIC2.01□□□□□ -2.09
VSX2P58304 TOMM20P4-201ENST00000427861 435 ntBASIC2.01□□□□□ -2.09
VSX2P58304 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 MTCO1P42-201ENST00000457379 726 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC004263.1-201ENST00000479327 332 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC109486.1-201ENST00000486833 374 ntBASIC2.01□□□□□ -2.09
VSX2P58304 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
VSX2P58304 SCARNA11.3-201ENST00000517276 130 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.01□□□□□ -2.09
VSX2P58304 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 DEFB108A-201ENST00000530110 222 ntBASIC2.01□□□□□ -2.09
VSX2P58304 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 AC021739.1-201ENST00000559631 174 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC135628.1-201ENST00000568867 534 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.01□□□□□ -2.09
VSX2P58304 MIR4307-201ENST00000582802 84 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 MIR3616-201ENST00000584070 92 ntBASIC2.01□□□□□ -2.09
VSX2P58304 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 AC245884.10-201ENST00000597355 337 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC008121.1-201ENST00000603244 268 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC091965.4-201ENST00000607691 587 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC108747.1-201ENST00000609508 535 ntBASIC2.01□□□□□ -2.09
VSX2P58304 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 AC016597.2-201ENST00000613256 341 ntBASIC2.01□□□□□ -2.09
VSX2P58304 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
VSX2P58304 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VSX2P58304 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VSX2P58304 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
VSX2P58304 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.01□□□□□ -2.09
VSX2P58304 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 FAM133CP-201ENST00000332869 704 ntBASIC2□□□□□ -2.09
VSX2P58304 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2□□□□□ -2.09
VSX2P58304 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
VSX2P58304 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2□□□□□ -2.09
VSX2P58304 NDUFS5P1-201ENST00000405668 289 ntBASIC2□□□□□ -2.09
VSX2P58304 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
VSX2P58304 RNU6-584P-201ENST00000410350 95 ntBASIC2□□□□□ -2.09
VSX2P58304 RNU2-68P-201ENST00000410878 191 ntBASIC2□□□□□ -2.09
VSX2P58304 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2□□□□□ -2.09
VSX2P58304 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2□□□□□ -2.09
VSX2P58304 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 GPM6BP2-201ENST00000432046 144 ntBASIC2□□□□□ -2.09
VSX2P58304 TIMM9P1-201ENST00000436122 256 ntBASIC2□□□□□ -2.09
VSX2P58304 AC098831.1-201ENST00000440661 216 ntBASIC2□□□□□ -2.09
VSX2P58304 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 GPM6BP1-201ENST00000446387 144 ntBASIC2□□□□□ -2.09
VSX2P58304 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2□□□□□ -2.09
VSX2P58304 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
VSX2P58304 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2□□□□□ -2.09
VSX2P58304 RNU5A-4P-201ENST00000516588 111 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms