Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 Y_RNA.295-201ENST00000364918 102 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 RNU6-140P-201ENST00000384566 108 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 MIR634-201ENST00000385208 97 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 UBA52P6-201ENST00000399822 382 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 RNU6-193P-201ENST00000410977 107 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN2P57739 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN2P57739 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 GTF2IP20-201ENST00000431663 360 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AL139415.2-201ENST00000431968 163 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN2P57739 RPL23AP11-201ENST00000475260 469 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 RPL7P47-201ENST00000497299 556 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 RNA5SP401-201ENST00000515920 127 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 RNU6-1315P-201ENST00000517187 99 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN2P57739 AMZ2P1-203ENST00000565833 850 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 MIR4425-201ENST00000580572 84 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 MIR3609-201ENST00000582661 80 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN2P57739 AL138880.2-201ENST00000616214 239 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC002553.4-201ENST00000616896 331 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC068831.7-201ENST00000616954 363 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN2P57739 AC024940.5-201ENST00000622889 474 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN2P57739 AL512643.1-201ENST00000635735 524 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 Z99571.1-201ENST00000636677 394 ntBASIC3.17□□□□□ -1.9
CLDN2P57739 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN2P57739 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN2P57739 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN2P57739 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN2P57739 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN2P57739 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN2P57739 RPL7P26-201ENST00000333817 754 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 Y_RNA.38-201ENST00000362617 102 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 RNU6-1035P-201ENST00000384477 107 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 USP9YP6-201ENST00000413550 854 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN2P57739 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC004801.2-202ENST00000463559 283 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 RPL38P4-201ENST00000502376 214 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 FAM92A1P2-202ENST00000504766 877 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN2P57739 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 AL137161.1-201ENST00000532231 390 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC068135.2-201ENST00000569293 1028 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN2P57739 AL137843.1-201ENST00000605078 385 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN2P57739 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 AL354685.2-201ENST00000448218 1447 ntBASIC3.16□□□□□ -1.9
CLDN2P57739 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN2P57739 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN2P57739 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN2P57739 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.15□□□□□ -1.9
CLDN2P57739 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN2P57739 RNU6-451P-201ENST00000362921 107 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN2P57739 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLDN2P57739 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLDN2P57739 SNORD37.1-201ENST00000390968 65 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AL138878.1-201ENST00000405131 347 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AL138885.1-201ENST00000405921 675 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AL606923.1-201ENST00000406616 190 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 RNU2-68P-201ENST00000410878 191 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN2P57739 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN2P57739 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN2P57739 MTND1P2-201ENST00000430604 821 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 RPL36AP53-201ENST00000432891 316 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 SNRPEP9-201ENST00000436794 238 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN2P57739 CECR9-201ENST00000453421 199 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 RNU7-180P-201ENST00000459240 63 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC012181.1-201ENST00000479895 423 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 LRRC34P2-201ENST00000514850 553 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC008885.1-201ENST00000514930 301 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 SNORA70.14-201ENST00000516205 110 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN2P57739 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms